KEGG   Syngnathus scovelli (Gulf pipefish): 125967523
Entry
125967523         CDS       T08785                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125967523
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sscv01009]
    125967523
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sscv03021]
    125967523
Protein phosphatases and associated proteins [BR:sscv01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125967523
Transcription machinery [BR:sscv03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     125967523
    Little elongation complex (LEC)
     125967523
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 125967523
NCBI-ProteinID: XP_049574658
LinkDB
Position
4:18076825..18093302
AA seq 598 aa
MASLGQDRRYGLSCGKNSNSKLGPNRTLYHVKLTDTAIRALEAYQNLKANLPSEPTICFE
GSQGYIKLPAPTAESPNALRVFSFYLSSDCKDQPQASFDCIHQYVSSDGRQQLEGQGVIQ
DKITVCATEDSYQMTRERMSQVEKDSWSRSAIEIKPGATRPSKSVKIHKRPPIVSASDGS
FCKPVSSRWSSSMASVHQKPLRERIIHLLALKSYRKPELLLWLERERVGPKDKAELGAIL
EEVAKVNPKDSSYLLKDDFYKYVRRDWPGYSEEERQLVSRLLLRKSQPPVHGHSRNPQAD
ESIGKPSGDRMPLQHSLTKNPLVKRPMPTHSLQPLAAKRQRQNDHRTQQQPVTNGLLNNK
GAPVADSLSFHAKPDFQRTNNTLGSYVGDHQHASLLALNVSSTADIPVTDQHRTKATSPE
PPRAESDCAQQQQKKKKSKKHKDKEREKLKDHQDKRWSEESLDLKHDQDKLGNCDITNDI
DLVEKPEYVSAYVRITSVEQRQRYQEDFNAEYDEYKDLHTRIATITHMFVQLASKIKSMS
PGTKEHKVMEDQILEKYNKYRKKFPGYQEEKKRCEYLHQKLSFIKQLIVDYDVSQGSS
NT seq 1797 nt   +upstreamnt  +downstreamnt
atggcttcgctcgggcaggaccgccgttacgggctgtcgtgcgggaaaaacagcaatagc
aaactcggacccaaccggacactttaccacgtcaagctcaccgacaccgccattcgagca
ctggaggcttaccagaacctcaaggctaatttaccaagtgagccgactatctgtttcgag
ggcagtcaagggtacattaagctcccagctcccacagcggaatcgccaaatgcgcttcgg
gtcttctccttctatttatccagcgactgtaaagaccagccacaggccagctttgactgc
atccatcagtatgtttcaagtgatggccgccagcagctggaagggcaaggagtcatccag
gacaagatcaccgtgtgcgccaccgaggactcctaccagatgacacgcgagaggatgtct
caggtcgagaaggatagctggagccgttcggccattgagataaaacccggagccacgcgt
cccagtaaaagcgtcaagatccataagaggccgcccattgtgtctgcatcagacggcagc
ttctgtaaacctgtgtcaagtcgctggagcagcagcatggcctcggtccaccagaagccc
ctcagggagcgcatcattcatctactggctctaaagtcctacaggaagccggagctcctg
ctgtggctggagagagaacgggtcggtcccaaggacaaggcagagctcggagctatattg
gaagaggtggcaaaagtgaaccccaaagatagcagctacctcctgaaagacgacttctac
aagtacgtgcggcgagactggcctggctacagcgaggaggagcgacaacttgttagcagg
ttgttgttgaggaagtcgcaacctcccgtgcacggccactcgaggaatcctcaagccgat
gaatcgatcgggaaaccatccggggatagaatgccgctgcagcacagtctgacaaaaaac
ccactagtgaaacgccccatgcctactcatagtctacaacctcttgcagcaaagagacaa
aggcaaaatgatcacaggacgcaacagcagccagtcaccaacggacttttaaacaataag
ggagcacctgtcgccgattctcttagtttccacgccaaacctgatttccaaaggactaat
aatactttagggagctatgttggagaccaccagcacgcttcccttttagcgcttaacgtg
tcaagcactgcagacataccagtgactgatcagcacagaaccaaagcgacgagccccgag
ccacctcgggctgagtcggactgcgctcaacagcaacagaagaagaaaaaatccaaaaag
cataaagacaaggagcgggaaaagttgaaagaccaccaggacaaaaggtggtcagaggag
agtctggatctcaagcacgaccaggacaaacttggaaattgtgacattactaatgacatt
gacttggtggagaaaccggaatatgtgagcgcctatgtcaggatcacaagcgtagaacaa
cgtcagcggtaccaggaggatttcaacgcagagtacgacgagtataaagatctgcacacc
cgaatcgccaccatcactcacatgtttgttcagctcgcgtccaagatcaaaagcatgtcg
cccggcaccaaagaacacaaggtgatggaagatcaaattttagaaaaatacaacaagtat
cgaaaaaaatttccgggttaccaggaagagaagaagcgctgtgaatatctgcaccagaaa
ctgtcgttcatcaagcagctcatcgtggactacgacgtctctcagggctcctcgtag

DBGET integrated database retrieval system