Syngnathus scovelli (Gulf pipefish): 125967609
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Entry
125967609 CDS
T08785
Symbol
cyld
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04217
Necroptosis
sscv04622
RIG-I-like receptor signaling pathway
sscv04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
125967609 (cyld)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125967609 (cyld)
04625 C-type lectin receptor signaling pathway
125967609 (cyld)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125967609 (cyld)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125967609 (cyld)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125967609 (cyld)
Peptidases and inhibitors [BR:
sscv01002
]
Cysteine peptidases
Family C67
125967609 (cyld)
Ubiquitin system [BR:
sscv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125967609 (cyld)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
125967609
NCBI-ProteinID:
XP_049574778
LinkDB
All DBs
Position
4:complement(19965921..19978517)
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AA seq
956 aa
AA seq
DB search
MSSVLWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLWIPRGSLGQACQERNNLGRPLP
PCKGKRSLRILDQTNVVLSLEERDVLEIDEKLAELLFPITNCEERYALLWNKSRLERVRD
IDCGSKVRVQLRSGDEPVPGVVRFKGSLLPDRALSGILFGVELLEEGRGQGFTEGSFQGR
QLFRCEDECGVFVALDKLELWEDDDDDDMGDLDLDHVTLVEEDQDYPPLEINSRVLVQTR
EGPERGTIIFCDLLPGNESLGYYVGVDMDNPIGEWDGMFDGKLLCNFASLEHTRLVPICD
VMPEYSMQDQRLQKHTFASRGNNNDKSSSGQSKPKSKGLAHQCSSRSKSEFYYTLNGSSV
DPPVQSKSKSTWYIDEVGEDPAKSLTETPPDFNQSPPPIRAPPPASLASDNKFHSLPFSL
NRKSGPVDNMSHGPLSLSVQSVMGEHAEAPSPTAPSSPRPATPTRGQPGLEVGSLVEVKE
NPPLCGVIRWVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFNCPPKKALFVKLKCCR
PDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRSETDGLDIMVGKKKGIQGHYNS
CYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVM
KLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMD
KKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDL
LEDTPRECRICGGLALFECRDCYDDGDITAGKIKQFCEKCNTQVHLHPRRKSHRHGKLCV
PKELQEGGGRQGAFPRQTMELFAVLCIETSHYVAFVKYGSDASAWLFFDSMADRDGGQNG
FNIPQVSPCPEVEAYLKMTPEELHTLDPKSIQGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagtcctgtggagccaggagaagcccagcgggggcttcagggaggactggcgt
ttctacatggtggtgaaggagtgcacggtggagaagcccccccagaagaccctgtggatc
ccacgcggcagcctcggccaggcgtgccaggagcgcaacaacctgggccgcccgctgcca
ccgtgcaagggcaagaggagcctgcgcattctggaccagaccaacgtggtgcttagcctg
gaagagcgtgacgtcctggagatcgacgagaagctggccgagctgcttttccccattacc
aactgtgaggaacgttacgccctgctctggaataagtcccggctggagcgcgtacgtgac
atcgactgcggctccaaagtgcgtgtccagttgcgttccggggatgagcctgtgcccggc
gtggtgcgcttcaagggctcgttgctgcccgacagagccctctcgggaatcctctttgga
gtggagttattggaggagggccgaggccagggattcacggagggttccttccagggccgc
cagcttttccgctgcgaggacgaatgcggcgtgttcgtggccctggacaagctggagcta
tgggaggacgacgacgacgacgacatgggcgatctggacttagatcatgtcaccctggtg
gaggaggaccaggactacccaccgctagagatcaactccagagtgctggtacagacccgt
gagggacctgagagaggcaccatcattttttgtgacttgctgccgggtaacgagagcctg
ggctactacgtgggtgttgacatggacaatccgatcggcgagtgggacggaatgtttgac
gggaagctgctgtgtaactttgccagtttggagcacacgcgacttgtccccatctgtgac
gtaatgccagaatattccatgcaggaccaaaggctgcaaaagcacacttttgcttccaga
ggcaacaacaacgacaagtcctcttctggccaaagtaaaccaaagagcaaaggattagct
catcagtgcagcagtaggagcaagtcagagttttactatactttaaatggcagctctgtt
gaccccccagtgcagtccaaatccaaaagcacatggtacattgacgaagttggggaggac
ccagcaaagtcgctcaccgaaactccccccgacttcaaccagtcccccccacccattagg
gcgccgccgcccgcctcgttggctagcgacaacaaattccactccctccccttcagcctg
aaccgcaagagcgggcccgtcgacaacatgagccacggaccgctctccctgtctgtccag
tcggtaatgggggagcacgccgaggcaccttcgcccaccgccccctcgtcgccgcggcct
gcaacccctaccagaggccagccgggtcttgaggtgggctccctggtggaggtgaaagag
aatccccctctgtgtggtgtcattcgctgggtgggtctgccaccaggcttgttggagcca
ctggctgggctggaactggaagaggagtgcccgggttgcaccgatggcaccttcaaagga
acgcgctacttcaactgcccgccgaagaaggccctcttcgtgaagctcaagtgctgtcgg
cccgactcccgcttcccgtcgctgcaccactcctccaaccccatcgagcgctgcaactct
atcgctttcgggggctatttaagcgaggtagtacacgagaacacgccgccccgcagcgag
acggatggtctcgacatcatggtcggcaagaagaaaggcatccagggccactacaactcg
tgctacttggattcaaccctcttctgtctcttttccttcagctccgtactggacacagtt
ctgctgaggccgcgctcaaagacagacgtggagtattacagagagacccaagaactgtta
cgcactgagatagtcaaccccctgcgcatacacgggtacgtgtgtgctaccaaagtgatg
aaactcaggaggatcctggagaaagtagaagctgcgtctggcttcacctctgaagaaaaa
gatccagaggagttcctcaatatactattccatcacatattgcgggtggaccctttgctc
aaactaaggtcagcgggacagaaggtgcaagactgttacttttaccagatcttcatggac
aaaaaagacaaggttggtgttcccaccatccagcagctcctggagtggtcgttcatcaac
agcgacctcaagtttgccgaggctccctcctgccttatcatccagatgccgcgctttggc
aaggacttcaaaatgttcaacaagattttcccctcactggagttagacatcacagatctt
ctggaagacactcccagggaatgtcgcatctgcggaggcctggccctctttgagtgccga
gactgctatgatgacggcgacatcacggcgggcaagattaagcaattctgtgaaaagtgc
aatacgcaggttcatcttcatccgagaagaaaaagtcaccggcacggcaagctgtgcgtc
cccaaggagctgcaagaaggcggcgggcgccagggcgcgttcccacgccagacgatggag
ctgtttgccgtgctgtgcattgagaccagtcactacgtggccttcgtcaagtatggcagt
gacgcctccgcctggctctttttcgacagcatggctgaccgagacggaggccagaatggc
ttcaacattccgcaggtgtcgccgtgccccgaggtggaggcctacctgaagatgacgccc
gaggagctgcacacgctcgaccccaagagcatccaaggccaggcccgacggctgctgtgc
gacgcctacatgtgcatgtaccagagccccaccatgagcctgtacaagtag
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