Syngnathus scovelli (Gulf pipefish): 125967622
Help
Entry
125967622 CDS
T08785
Symbol
kcnq1.1
Name
(RefSeq) potassium voltage-gated channel subfamily KQT member 1.1 isoform X1
KO
K04926
potassium voltage-gated channel KQT-like subfamily member 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
125967622 (kcnq1.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125967622 (kcnq1.1)
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
125967622 (kcnq1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
KCNQ_channel
Ion_trans_2
2TM
Motif
Other DBs
NCBI-GeneID:
125967622
NCBI-ProteinID:
XP_049574793
LinkDB
All DBs
Position
4:11151454..11171520
Genome browser
AA seq
607 aa
AA seq
DB search
MSNFARSRGNTRKSPDERSSDWELGESNFGASNNHRSTMEAPAIHLQPYLLQPRIMSGRM
SLYSSRVRPVLTHASLQTRVYNFLERPSGWKCFVYHFTVFLLIIACLILSILSTIPTSQD
SVFPALFWVEIFVVVFLGLEYIVRLWSAGCRSIYVGFCGRLRFARKPIIIIDLIVVVSSI
FVLAVGSNGQVFATSAVRGIRFLQILRMLHVDRQGGTWRLLWSVVYAHHQELITTLYIGF
LCLIFASYFVYLAEKEADTFHTYADALWWGVVTVTTVGYGDLVPQTWIGKMIASCFSVFA
ISFFALPAGILGSGFALEVQQKQRRKHFNRQIPAAASVIQSSWRCFALENSDSATYKMFF
RKRSQTLNSLSTTTPKKLEKKDASPNILTIPSSQKNNVLSSDVCKTVNTEKNLGFLDFDP
STGLKTKCSSADNLDQELERDCALTAATSISQLTKSHRQAIRVIQKMRYFVAKSKFQQAR
KPYEVRDVIEQYTHGHLNLMVRIKEIQRRLDQSLGKTTSFQTGADRTKEKGNNSIGARLS
RMEDKITHMDQMLNHIANSLNILPARRDVNGGERERGPQSGPSSNINPSHDGLPSYEHLS
SKLQDSD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattttgcacgctctcgggggaacacacggaagtctccagatgagagatcatca
gactgggaactgggagagagcaacttcggcgcgtccaacaaccaccgatcaactatggag
gcaccagcaattcatcttcagccttacttacttcagccccgcattatgtcggggcgcatg
tcgctgtacagcagcagggtgcgacctgtcctcactcacgcctctctccaaacacgtgtg
tataactttttggaaaggccatccggctggaagtgcttcgtttatcacttcaccgtgttc
cttctaattattgcttgcctgattctcagcattctgtcaaccattcccacgtcacaggac
tctgttttccccgctctcttttgggtggagatttttgttgtggttttcttagggttggaa
tatattgtccggctttggtcagcaggttgtcgcagtatatatgttggcttctgtggacga
ctacgattcgcaaggaagccaataatcatcatagatctgattgttgtcgtttcctcaata
ttcgtgctagcagttggttccaatgggcaggtgtttgcaacctctgctgtgagggggatc
cgtttcctgcaaatactgcgtatgctgcacgtagaccgccagggaggtacatggcgtctg
ctctggtctgttgtctatgcccatcaccaggagctgatcacaacactctacattggcttt
ctgtgcctgatcttcgcctcgtactttgtctacctggcagaaaaagaagctgacacgttt
catacatacgctgatgctctgtggtggggagtggtaacagtgacgaccgttggctacgga
gacctcgttcctcagacgtggatcggaaagatgattgcatcgtgtttctctgtctttgcc
atatccttctttgcacttcctgcaggaattttaggctcaggctttgcgctggaggtgcag
cagaagcaaagacggaaacatttcaacagacaaatccccgctgctgctagtgtgatccag
tcatcatggagatgttttgcattggaaaattcagattcggccacatataagatgtttttc
agaaagagatcacaaacccttaactcactgtcgaccacaacgcctaagaaactggagaag
aaagacgcctccccaaatattctcacaattccgagcagtcagaagaacaacgttttgagc
tctgatgtatgcaaaacagtgaacacagagaaaaatcttggctttttggattttgatcct
tccaccggccttaagacaaaatgcagttcagcagacaacctggatcaggagctggagcga
gactgtgcactgactgcggctacctccatatctcaactaaccaagtcccatagacaagct
atccgtgtgatccagaaaatgcgctattttgtggcgaagagcaagttccagcaagctcgt
aaaccatatgaagtccgagatgtgattgagcaatacacccatggtcatctcaatctaatg
gtgcggataaaggaaatacagagaagactggaccagtctttagggaagacaacttctttc
cagactggagcagatcgaaccaaagagaagggaaacaactccattggagcccgactcagc
aggatggaggacaagatcacacacatggatcaaatgctgaatcacattgcaaactctctc
aatattctgccggcccggagagatgtcaatgggggcgaacgggagcgtggaccacagtct
ggccccagcagcaatatcaaccctagccacgatggtctgccaagctatgagcacctgtca
tcaaaattgcaggacagcgactga
DBGET
integrated database retrieval system
