Syngnathus scovelli (Gulf pipefish): 125967632
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Entry
125967632 CDS
T08785
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04810
Regulation of actin cytoskeleton
sscv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125967632 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125967632 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125967632 (cyfip1)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125967632 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
125967632 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
125967632
NCBI-ProteinID:
XP_049574819
LinkDB
All DBs
Position
10:complement(2355030..2366258)
Genome browser
AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSVMYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCSEVRRLCHTERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYEELLAD
IVNLCAEYYDNKMYLTPGEKHMLLKVMGFGLYLMDGNSSNIYKMDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWTCTSISSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDLEYRKLFDLALQGMQLMSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YSVLQDFSQVTLRDPLRQAIKKKKNVIQSVLQAIRKTVCDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIERFHRESF
FYTHLLNFSETLQHCSDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKESSM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRADCKNQGANIPWPASNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALYKSL
ELAINRFESEDLTSIMELEGLLEINRLTHKLLCKFLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKTLNLTYSS
IFSCYRNFVGPPHIKVMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQSLREVGNALLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHIKEGERLDAKMKRLEAKYTALHMVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILARVRGFLDDPIWRGPLPGNGVMHVDECVEFHRLWSAMQFVYCI
PVGEHEYTVEQCFGDGLHWTGCMIISLLGQQRRFDILDFSYHLLKVQKHDGKDELIKSVV
LKKMVDRIRKFQVLNNEIFAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccactgtgactttagaggatgcactgtccaacgtggaccttctggaggagctg
ccgctgcccgaccagcagccgtgcatcgagcccctcccctcctcggtcatgtaccaaccc
aacttcaacaccaactttgaggaccgcaacgccttcgtcacgggcatcgctcgatacatc
gagcaggccaccgttcactccagcatgaatgagatgctggaggaaggtcaagagtacgcg
gtcatgctgtacacctggaggagctgctcacgcgcaattccacaggtgaaatgcaacgag
cagcccaaccgggtggagatctacgagaagacggtggaggtcctggagcctgaagttacc
aaactgatgaacttcatgtactttcagcgcaccgccatcgaccgcttctgcagcgaggtg
cgccgcctgtgccacaccgagcggcgcaaggactttgtgtcggaggcctacctgctgacg
ctggggaaattcatcaacatgtttgccgtgctcgacgagctcaagaacatgaagtgcagc
gtcaagaacgaccactcggcttacaagcgcgccgcccagtttcttcgtaaaatgtctgag
ccctcatccattcaggaatcccagaacttgtccatgttcctggcaaaccacaacaaaatc
actcagtctttgcagcaacagctggaggtgatcaacggctacgaagagctgctggccgac
atcgtcaacctgtgcgctgagtattacgacaacaagatgtacctgacccccggagagaag
cacatgctgctcaaagtcatgggctttggcttgtacctcatggatggaaacagcagcaac
atctacaagatggacgccaagaagagaatcaacctgaccaagattgataagtttttcaag
caactacaggtggttccacttttcggcgacatgcagatcgagttgtcccggtacatcaag
accagcgctcactttgaggagaacaaatccagatggacatgcacgtccatatccagcagc
cctcagtacaacatctgcgagcagatgattcagatccgcgaggatcacatgcgcttcatc
tccgagctcgcccgctacagcaacagcgaggtggtgaccggctcggggcgtcaggaggcc
cagaagacggatttggagtacaggaagctttttgacttggctctgcagggcatgcagctc
atgtcgcagtggagcgctcacgtcatggaagtgtactcctggaaactggtgcatcccacc
gacaagtattccaacaaggagtgccccgacaatgccgaggaatacgagcgcgccactcga
tataactacaccagcgaagaaaagtttgccctggtggaggtgatcgccatgatcaaaggt
ctgcaggtgctgatgggccgcatggagagcgtgttcaaccacgccatccgccacaccatc
tactcggtcctgcaggatttctcgcaggtgaccctgcgtgacccactgcgccaggccatc
aagaagaagaagaacgtcatccagagtgtgctccaagccattcggaagacggtgtgcgac
tgggagacgggtcgtgagccacacaatgacccggccctccgtggcgaaaaggaccccaag
ggcggattcgacatcaaggtccctcgacgagccgtgggaccttccagcactcagctctac
atggtgaggaccatgttggagtccctgatcgccgacaaaagcggctccaagaagaccttg
cgcagcagtctggagggccccaccatcctggatatcgagaggttccaccgcgagtccttc
ttctacacccacctgctgaacttcagtgaaaccttgcagcactgttccgacctctcccag
ctttggtttagggagttcttcctggagctcactatgggacgcaggatccagttccccatc
gagatgtccatgccctggatcctcacagatcacattttggagaccaaggagtcttctatg
atggagtacgtgctttatcctctggatttgtacaacgacagcgcccactacgccctgacc
aagttcaagaagcagttcctctatgatgaaatagaagccgaggtcaacttgtgcttcgat
cagtttgtctacaagctggccgatcagatattcgcttactacaagatcctcgccggaagt
cttctcctggacaaacgtttgcgtgctgactgtaagaatcagggcgccaacattccttgg
ccggcctccaaccgctacgagactctgctgaagcagcgccacgtacagctcctcggccgc
tccatcgacctgaacagactcatcactcagagggtctcggccgccttgtacaagtccctg
gagctggccatcaaccgctttgagagcgaagatctcacttcaatcatggaactggaagga
ctcctcgagatcaaccgcctgacgcacaagctcctctgcaagttcttgacgctggacagc
tttgacgccatgttccgcgaggccaaccacaacgtgtcggcgccgtacggccgcatcacg
ctgcacgtcttctgggagctcaactacgacttcctgcccaactactgctacaacggctcc
accaacaggttcgtgcgcacagtccttccgttctctcaggagttccagagggacaagcca
cccaatgctcaaccgcagtatctctacggatccaagacgctaaacttgacctacagcagc
attttcagctgctaccgcaactttgtgggcccaccgcacatcaaggtcatgtgccggctg
ctgggctaccagggcatcgccgtggtgatggaggagctcctcaaagtggtcaagagcctg
cttcagggcaccatcatgcagtacgtgaagaccctgatggaggtgatgcccaagatctgc
cggcttcctcgccacgagtacggctcgccaggaatcctggagttcttccaccaccagctg
aaggacatcgtggagtacgccgagctcaagacggtttgcttccagagcttgcgggaagtg
ggcaatgccctcctcttctgtctactcagcgagcagagtctgtcacaggaggaggtttgt
gatctgttacatgcagcaccttttcagaacattctgcccagggtccacattaaagagggt
gagcgcttggacgccaagatgaagcgcctggaggccaaatatacggcactgcacatggtt
cctctcatcgagcgtctcggcacgccgcagcaaatcgccatcgctcgtgagggcgacctg
ctgaccaaggaacgtctctgctgcggcctgtccatgtttgaggtgatcctggcgcgcgtt
cgcggcttcctggatgaccccatctggcgcggccctttgcccggcaacggcgtcatgcac
gtggacgaatgcgtggagttccaccgcctgtggagcgccatgcagtttgtctactgcatt
cccgtcggcgagcacgagtacaccgtcgagcagtgcttcggcgatggtctccactggaca
ggctgcatgatcatcagcctgctgggccagcagagacgcttcgacatcctggacttcagc
taccacctcctcaaggtgcagaagcacgacggcaaggacgagctcatcaagagtgtagtg
ctgaaaaaaatggtggaccgcatccgcaagttccaagtgctcaacaacgagatcttcgcc
atcctgaacaagtacctcaagtcgggcgatggtgagaacatgccggtggagcacgtgcgc
tgtttccagccgcccattcatcaatcgctggccagcagttga
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integrated database retrieval system
