Syngnathus scovelli (Gulf pipefish): 125967636
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Entry
125967636 CDS
T08785
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125967636 (samd4a)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125967636 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
125967636
NCBI-ProteinID:
XP_049574822
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All DBs
Position
4:complement(8226520..8275143)
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AA seq
718 aa
AA seq
DB search
MMFRDQVGILASWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLADCTELQVLEA
DANNSEVISQWQSEPKERVISLVLTHLPLLKPGNIEAKGEYMRLLPRILAHTIEHGRHLE
ESRQLLSYALIHPATSLEDRAALALWLNHLEERAAATGDSLERPSPAGPHHHQSTPPSTL
TSSGSSTNSSSSGNLYALHHHQRYGSDDRLNGWQSNRDSGLGRGWQQQGCENGHLPLYPS
SSVPATINTIGTGGSGNAILTSGSGNQPHSPLKRSVSLTPPMSGPNNHPMGPVWLSQEDL
RSSRGPAPDHAPLSPQSSIASSGSGGSEHLEEASLGGGLSLHRSCFHEEGSGMRDVPAWL
KSLRLHKYAALFSTMTYDEMMSLTEEQLEAQKVTKGARHKIVISIQKLKERQNLLRSLEK
DVLEGSNLRVPLQELHQMIMTPIKAFTSGEETSLQRPLLNTESKSSAPGSHLAGGGGEAE
ASSSVIAEGDLPSQFTRVMGKVCTQLLVSRSDEDNISSYLQLIDKCLIHESFGETQKKRL
LSWKQQVQRLFRSIPRKTLLDIAGYRTQRSSRGFGQSNSLPTTSCVGGSVMARRSLRQFQ
MPSRSLPGARLGLLSSSGLLGPTPRSSSSTPTGPKQGRQGLWFANPGGSNSMPSRTHSSV
QRTRSLPVHTTPQTMVMFQQADLQLPVTEPDINNRLESLCLSMTEHALGDGADRTSTI
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgatcaggtgggcatactagccagctggttcaaagggtggaatgagtgt
gagcagacagtggctctgctgtctttgctgaagagggtgagccggacccaggctcgtttc
ctgcagctctgtctggagcactccctcgcagactgcacggagctccaggttctggaggca
gatgccaacaattcagaggttatcagccagtggcaaagcgaaccaaaagaacgtgtcatc
tctcttgtcctcacccatttgccattgctcaaaccaggcaatattgaagccaagggcgaa
tacatgcgcctactaccacgcatccttgcgcacactatcgaacatggccgccacctggaa
gagtctcgccaactcttatcgtatgctctcatccaccctgccacctccctggaggaccgt
gctgcattggccctctggctcaaccatcttgaagaaagggccgctgccacgggagactca
cttgaaaggccatcgcctgccggcccacaccaccatcagtccactccaccgtctaccctt
acatcatcgggatcctccacaaacagttcctcttcaggtaacctatatgctttgcatcac
caccagcgatacggctcggacgatcgcctcaatggatggcaaagcaacagggattcaggg
ctcggaagaggctggcagcagcagggctgtgagaacggacacctgcctctctacccatca
tcctctgtaccagcaaccatcaacacaatcggaactggtggcagtggtaatgccatccta
accagtggaagtggcaaccagccacacagtcctctgaagcgctcagtgtctctaactcca
ccaatgagtggcccaaacaaccatcctatgggtcctgtctggctgtcccaggaagatctg
cgtagtagtagaggcccagcccctgatcacgcacccctctcccctcaaagcagcattgct
tcctcaggcagtggaggaagtgaacatctggaagaggccagtttgggaggaggtttaagt
ctacatcgcagttgcttccatgaggagggcagtggcatgagggatgttcctgcatggctg
aagagtctccgtcttcataagtatgcagcgctgttttctaccatgacctatgatgaaatg
atgtcactgactgaagaacaactggaggcacagaaagttaccaaaggagcaagacataag
attgttattagcattcaaaagctgaaagagagacagaacttgctgcgcagcctcgaaaaa
gatgtattagagggcagtaatctgcgtgtaccgctgcaagaacttcatcagatgatcatg
acgcctatcaaggctttcacaagtggcgaggagacgtccttgcagcgccctctcctgaat
acggaatccaaaagctctgcacctggatcacatctcgctggaggaggtggagaggctgag
gcaagctcaagtgtcattgcagagggggatctaccaagccagttcactcgtgtcatgggc
aaagtttgcactcagcttctggtgtcaaggtcagatgaggacaacatcagctcctaccta
caactcattgacaagtgtcttatccatgagtcctttggtgaaactcaaaagaagaggctg
ttgtcatggaaacagcaggtccagaggctgttcagatccattccgagaaaaacgctcctt
gacattgcaggttacagaacgcagaggagcagtcgtggattcggtcagtccaactccctc
cctaccacaagctgtgttgggggcagtgttatggcacggagaagccttcggcagttccag
atgccctcgaggagcttaccaggtgcaaggctaggcctgctaagcagtagtggcctgctg
ggacccacgcctcgcagtagcagcagcacacccacgggccccaagcaggggagacagggt
ctgtggtttgccaatcctggaggcagcaacagtatgccgagtcgaactcacagctccgtg
caacggacccgctccctgcctgttcatacaactccgcaaactatggttatgttccaacaa
gctgatcttcaattgccagttacggagccggacatcaacaatcgccttgaatctttatgt
ctcagtatgacagagcatgcattgggagatggtgccgatcgcacatcgactatatga
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