Syngnathus scovelli (Gulf pipefish): 125967738 Help Entry 125967738         CDS       T08785                                  Name (RefSeq) protocadherin-9 isoform X1   KO K16498   protocadherin delta 1 Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:sscv00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     125967738  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:sscv01009]     125967738   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:sscv04515]     125967738 Protein phosphatases and associated proteins [BR:sscv01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      125967738 Cell adhesion molecules [BR:sscv04515]  Cadherins   Protocadherins    125967738 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 Neur_chan_memb RCR MAP17 Cadherin_4 Motif Other DBs NCBI-GeneID:  125967738 NCBI-ProteinID:  XP_049575011 LinkDB All DBs Position 4:22077074..22179994 Genome browser AA seq 1235 aa AA seqDB search MDLKDYYLLGALLACIWLDPSIAQELIYPIREELQENVLIGNIPRDLNISHTNAATGASA NLVYRLVSKAGDNPLVRVLSSTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND YFRLIKIKIIVRDTNDNAPMFPSPVINISIPENTLINNRFAIPSATDPDTGPNSVHKYEL INGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVT VTDVNDNRPVFKESQVEVHIPENSPIGTSVVQLQATDADVGANADIRYVFGTQVSPATKR LFALNSTSGLITVQRPLDREETAIHKLSVVASDGSPSPARAIISINVTDVNDNPPNIDLR YIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDVPFHLKAVYDNQYLL ETSALLDYEGSKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMEN NKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDKFLFT ITARDNGTPPLQTQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA GENAAVSLSILNDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAVDSGRPPCSSAAKV TINVIDVNDNTPVVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVHGN NKGLFRIDPVTGNITLEEKPAVSDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNY SLITDLIRRRMETPIERNISESSETYQSGDYLTIMIAFVTGALVVIIVIFVTVLLRCRHT SRFKAAQRKKQGTEWMSPNTENKQNKKKKRKKRKSPKSSLLNFVTIEGNKPNDPAHEPIN GTISLPTELEEQGIGRFDWNATPTTTFKPGSPDLARHYKSASPQSAFHLKADTPVSVKKH HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKAPMHTRQQGTLTRART ELNPEYLDLRPRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGEHEPVGSGSLL TQPLPLVQAQDDFYEQASPDKRTEADGNSDPNSDGPLGPRGLMEASEMCTQECLVLGHSD NCWMPPTLASYQQHKSPVSSFGSQREWGPKDKFLNGHTLTRTWKKENGQSDFGDRKQFGS EEGHFTSSGMADIPLVSLKSCQTASCPDSPKDQQL NT seq 3708 nt NT seq  +upstreamnt  +downstreamnt atggatctaaaagactattacctgttgggtgctttgcttgcctgcatatggttagaccct tcaatagcccaagaactcatctaccccatcagggaggagctgcaagaaaatgtcctcatt ggaaatatacccagagaccttaacatctcccacacaaacgctgccactggagcaagtgct aatcttgtgtaccgcttggtctccaaagcaggagacaaccctctggtccgcgttctgagc agcaccggtgagatattcacaacatcaaaccgaatagatagggagaagctctgccccggt ccctcctttgaggacagcgagtgctcctttgaaattgaagtggtcatcctgcctaatgat tatttcaggctgattaaaatcaaaataatcgtcagagacacaaatgataatgcgcccatg ttcccatccccagtgatcaacatctccatcccggagaacacgctcattaataatcgcttc gctattccttcagccacggacccagacaccggtccaaacagtgtgcacaaatatgagctg atcaatgggcaaagtgccttcggcttagacatagtggaaacgccagagggtgagaagtgg ccccagctcattgtgcagcagaatctggacagagagcagaaggacacctatgtgatgaaa attaaagtggaggatggcgggagcccgcagaaatccagcaccgccattctccaagtcacc gtgacagacgtcaacgataaccgacccgtctttaaggagagccaggtcgaggtgcatatt ccggagaactctcctatcggcacgtctgtcgtgcagcttcaggccaccgacgcggacgta ggggccaacgcggacattcgatatgtatttgggactcaggtgtcacctgctacaaagagg ctgtttgcactaaatagcacatccggcctcatcactgtgcagaggcctctggacagggag gaaacggcaatacataaactctccgtcgtggctagtgacggcagcccgagcccggccaga gctatcatttcaatcaacgtgaccgacgtcaatgacaatccccccaatatagacttgaga tatataatcagtcccattaatggcactgttttcctctccgagaaggaccccattaatacc aagatagccctcatcacagtgtcagacaaagacaccgacatcaacggcaaggtcatttgt ttcatcgagaaggatgtgcccttccatctcaaagccgtgtacgacaaccagtatcttttg gagacatctgccctgctcgactacgaaggcagcaaggaatataacttcaaaatcgtggct tctgattccggaaagccgagcttgaatcagaccgccttggtgagagtgaggctggaggac gagaatgacaacccccctattttcactcaaccggtcattgaactggctgtcatggagaac aacaaacgggacctgttcctcaccactctaagtgccacggatgaggacagtggtaaaaac gcagagattgtttatcagctcggaccgaacgcctcgttctttgatcttgatcggaaaacg ggggttctgactgcatccagagtttttgaccgtgaggatcaggacaagtttctgttcacg ataacggcacgagataacggcaccccgcctctgcagacccaagcggccgtcattgtaacc gtgctggatgaaaatgacaacaaccccaagttcacacacaaccacttccagttttttgtc tcggagaatctcccaaaatacagcacagttggcgtgataaccgtgacggattctgacgcc ggggaaaacgctgccgtttcactttccattctgaacgacaacgaaaacttcatcttggat cctttctccggcgttatcaagtccaacgtgtcgtttgatcgggagcaacagagttcctac acctttgacgtgagggccgtggacagcggcaggcctccttgctcctcggccgccaaggtg accatcaacgtcatcgacgtcaacgacaacacccccgtcgtcatctacccgccctccaac acgtcttttaagctcgtcccgctttcctccatccccggatcggtggttgccgaggtgttt gcggtggacggcgacacggggatgaacgccgaactgaaatacacgatcgtgcacggcaac aacaagggcctgttcaggattgaccccgtcaccgggaacatcacgctggaggagaagccc gcagtgagcgatataggattacacagattagtggtgaacatcagtgatttaggatacccc aaatccctccataccctggtgctggtattcctttacgtcaacgataccgtgggcaactac agcctaatcaccgatctcatccggcgacggatggaaaccccgattgagcgcaacatcagc gaaagcagtgaaacttatcaaagcggggactatttaaccatcatgatcgcttttgtgacc ggcgccttagtggtgatcattgtgatctttgtgaccgtcctgctgcgctgccggcacacg tccagattcaaagctgcgcagaggaaaaaacagggaacggaatggatgtccccaaacact gagaacaagcaaaacaagaagaaaaagcgcaagaaaaggaaatctccaaagagctcctta ctcaactttgttaccatcgagggaaacaaacccaacgatcccgcccacgaaccaatcaac ggaaccatcagcctgcccaccgaattggaggagcaagggataggacgctttgattggaat gccacaccgaccaccaccttcaaacccggcagccctgacctggcccgacactacaaatct gcctcgccgcaatcggccttccacctcaaggctgacacgccggtctccgtcaagaagcat cacgtgattcaggagctgccgctggataacacctttgttgggggctgcgacaccctttcc aagaggtcctccacaagctcagaccacttcagtgcctcggagtgcagctcccaaggaggg ttcaagaccaaggcgcccatgcacaccagacagcagggaacattaacacgcgcccgaact gaactgaaccccgaatatctggacctacgtccccgagctgagctcaaccctgaatattgg accccttgcacgcccttatcgcagcgacgcgtcacgtttcacctgccggacggctcccag gagagctgcagtgacagcggtctgggggagcacgagcccgttggcagtggctccctcctc acacaacctctccctctggtgcaggcgcaagacgacttctacgagcaggcctcccccgac aagagaaccgaagcagacggcaactctgatcccaactctgatgggcccctgggacctcgt ggcctgatggaggcctcggagatgtgcacacaggaatgcctggtcctcggacattcggac aactgctggatgcccccgacgctggcgtcctaccagcagcacaaatcccccgtgtccagt tttgggtcgcaaagggagtggggtcccaaggataaatttctcaatggacataccttgact cgaacctggaaaaaagagaacgggcagtcggactttggtgacaggaagcaatttgggagc gaagaaggacacttcacaagcagtggcatggctgatattcctttggtaagtttgaagtcc tgccagacagcttcctgcccagatagccccaaggaccagcagctttaa

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