Syngnathus scovelli (Gulf pipefish): 125967750
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Entry
125967750 CDS
T08785
Symbol
gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125967750 (gabra5)
04082 Neuroactive ligand signaling
125967750 (gabra5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125967750 (gabra5)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
GABA-A
125967750 (gabra5)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
125967750
NCBI-ProteinID:
XP_049575033
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Position
10:2278974..2288215
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AA seq
461 aa
AA seq
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MGDGMQRSFAMRRTWLCFLLASLTCRLSLQQEATGTPSETELINNITVFTRILDGLLDGY
DNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFEGPMKMLPL
NNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLQDDGTLLYTMRLTISAECPMQLEDF
PMDAHACPLKFGSYAYPVSEVVYTWDKGAAKSVVVGEEGSRLNQYHLTGQTAGTEDIHTS
RGQYTVMMAHFFLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAMEAQ
QPKRKDPLVLSKKPNNACTAGVNYTTNLTKDASVSTISNSTSVQLKGPPESKGADPKKTY
NSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPHATPPST
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatggaatgcagcgcagctttgcaatgagacgcacgtggctctgcttcttgctc
gccagcctcacctgccgcctgagcctccagcaggaggcgacggggaccccctccgagacg
gaattaattaacaacatcacagtgttcacccgcatcttggacggactgttggatggctac
gacaacaggctgcgccccggactgggagaaaaggtgacggagatcaaaaccaacattttt
gtcaccagcttcggtccagtctcggacacggaaatggagtacaccatcgacgtgttcttc
cgccagagctggaaggatgagcgtctgtgcttcgaagggcccatgaagatgctgccgctc
aacaaccttctggccagcaacatctggacgcccgacaccttcttcctcaacggcaagaag
tccatcgcgcacaacatgaccacgcccaacaagctgctgaggctgcaggatgacggcacg
ctgctctacaccatgagattgactatatctgcagagtgccccatgcaactggaggacttc
cccatggacgcgcacgcctgccccctcaagtttggaagctatgcgtacccggtctcggag
gtggtctacacttgggataagggggcggccaagtcggtggtggtgggcgaggagggctcc
aggctcaaccagtaccacctgactggtcagacggccggcacggaggacatccacaccagc
agaggccagtacacggtgatgatggctcacttcttcctgaagaggaagatcggctacttc
gtcatccagacgtacatgccgtgcttcatgaccgtcatcctgtcgcaagtctccttctgg
ctcaaccgcgagtccgtgcccgcacgcaccgtctttggtgtgaccacggtgttgaccatg
accacgctcagcatcagcgcccgcaactcgctgcccaaggtggcctacgccaccgccatg
gattggttcatcgccgtttgctacgccttcgtcttctccgccctcatcgagttcgccacc
gtcaactacttcaccaagcgcagctgggcctgggacggcaagaaggccatggaggcccaa
cagcccaaacgtaaagaccccttggtgctatccaaaaaacccaacaacgcctgcacggcc
ggcgtcaactacaccaccaacctgaccaaggacgcgtccgtgtccaccatctccaacagc
acgtcggtccagctcaaggggccccccgagtccaaaggcgccgatcccaagaagacctac
aacagcgtcagcaagatcgacaagatgtcccgtatcgtgttccccgtcctgttcggcacc
ttcaacctggtctactgggccacctatctcaaccgggagccgcacgccacgccgcccagc
acttaa
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