Syngnathus scovelli (Gulf pipefish): 125967778
Help
Entry
125967778 CDS
T08785
Symbol
nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125967778 (nudt21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125967778 (nudt21)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
125967778 (nudt21)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
125967778
NCBI-ProteinID:
XP_049575073
LinkDB
All DBs
Position
4:14860111..14862928
Genome browser
AA seq
229 aa
AA seq
DB search
MSVAPPNRSSTGWPRGSSSQFGSKYMTGPAKPLTLERTINLYPLTNYTFGTKEPLYEKDS
SVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELSPGEDEV
EGLKRLMTEILGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQ
LQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcgccccccaatcgttcgagcacaggttggccgcgcgggagttcctctcag
tttggaagcaaatacatgaccggcccggcgaagcctctcaccctggagaggactatcaat
ctttatcctctcaccaactacacctttgggaccaaagagcctttgtatgagaaggacagc
tcagtggcggccagattccagcggatgcgcgaggagtttgacaagatgggaatgaggagg
accgtggagggcgtacttatcgtccacgagcataggctgccgcatgtcctacttctgcaa
ctgggcactactttcttcaagctgcctggtggggagttgagtcctggagaagatgaggta
gaagggctgaaacgcctaatgaccgagattctcgggcgccaggatggcgtgaagcaggat
tgggtgattgatgactgtattggcaactggtggcgccccaactttgagcctccacagtat
ccctacattccagctcatattaccaaacctaaggagcataagaaacttttcctggttcag
ctgcaggaaaaagcactgtttgccgtcccaaaaaattataaactggtggcagccccgttg
tttgagctgtatgacaacgcccctgggtatggacccatcatttctagcctaccgcagctc
ctcagcaggttcaacttcatctacaactaa
DBGET
integrated database retrieval system
