Syngnathus scovelli (Gulf pipefish): 125967786
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Entry
125967786 CDS
T08785
Symbol
ppfia1
Name
(RefSeq) liprin-alpha-1 isoform X1
KO
K26226
liprin-alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125967786 (ppfia1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125967786 (ppfia1)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125967786 (ppfia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Asd-4
Motif
Other DBs
NCBI-GeneID:
125967786
NCBI-ProteinID:
XP_049575085
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All DBs
Position
4:6637125..6690066
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AA seq
1249 aa
AA seq
DB search
MMCEVMPTISETEGPNGGGGTGHRGSGSPLQSDSEGHFESLMVSMLEERDRLLETLRETQ
ENLSLAQGKLHEVGHERDSLQRQLNTALPQEFAALTKEVNMCREQLLEKEEEIAELKAER
NNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKV
RERLRVALERCSALEEQLTLSHKELAYLREQGCQKRGLADGTSEVNHNSENTPSTNGKRS
SDGSLSQEDESGSGFGKVGELQGVVDRQTADLGQMKERMAAMASRISELEEDVDTARKDL
IKSEDMNTRLQRDLRESMAQKDDMEERITTLEKRYLAAQREATSVHDLNDKLENEVANRE
SLFRQTEDRNRQLQEKLELAEQKLLQTIRKAETLPEVEAELAQRVAALTKAEERHGNVEE
RLRQLESQLEEKHQELLRARQREKMNEEHNKRLSETVDKLLSESNERLQLHLKERMSALE
DKNALIRELEHTKKLIEESHHEKEQLLIQIETLRAENEQGRSRSNSLLHGRSQLGSTPDF
RYPVSASSMMDSNSDHYGGALVLRRPQKGRVAALRDEPSKVQTLNEQEWERVQQANVLAN
VAQAFESDMDASDLEEDRETIFSSVDLLSPGGQADAQTLALMLQEQLDAINNEIRMIQEE
KENTAIRAEEIEYRVGSGDSLGGRFRSISSLQPSLSAGSPMGSNSPPGSGHSTPRRIPHS
PHRELDRMGVMTLPSDLRKHRRKSAQDDKTTIQCETSPPTTPRSMRLNREAGYAASHEDI
RDIRGLGIQDGQGSNPSSSNSSQDSLNKAAKKKSIKSSIGRLFGKKEKGRPSLPGKDSPS
QGGTPEAENSPKDGLGMGTLGGPAEKNRKLQKNPKTGHELLDEARRQGLPFAQWDGPTVV
VWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSL
TSPSAPPTSRTTTGNVWVTHEEMESLAATPPTEDDESSWAQTLAYGDMNHEWIGNEWLPS
LGLPQYRSYFMESLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGVMCLRRLNYDRKEL
ERRREECQLEFNDVLVWSNERLINWIQAIGLKEYSANLYESGVHGALLSLDETFDHNTLA
LLLQIPTQNTQARATLEREYNRLLAIGTDRRMEEDEDKNFRRAPSWRKKFRPKDMRGMPL
GASDTLPANFRVTSNASSASTQPKRSPMDGNRWSEDEGEFPAFKTRMMN
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaagtgatgcccaccatcagtgagacagaagggcctaatggaggaggtggc
acaggtcatcgagggtccggctccccattacagtcggactctgaaggtcattttgaatca
ctgatggtgtccatgttagaggagagggatcgtcttcttgaaactctgagggagacccaa
gaaaatctgagtttggcccagggtaagctgcatgaggtcggtcacgaaagggactccctc
cagagacaactcaacactgctttgccacaggagtttgcagcactaacaaaagaggtgaat
atgtgccgggaacaactgctggaaaaggaggaagagattgcagaactgaaagctgagaga
aacaacacacggctcctcttggagcatttggagtgcctggtttctcgtcatgagcggagt
ctgaggatgacagtcgtgaaacgacaagctcagtctcctgctggagtctcaagtgaagtg
gaagtcctcaaagcccttaagtcactttttgaacaccataaagcccttgatgagaaggta
agagagagactgcgagtcgccttggaaagatgtagtgctttggaggaacagttaactctg
tcacacaaagagttggcttacctcagggagcagggctgccagaaaaggggattggctgat
ggaaccagtgaggtcaaccacaactctgaaaatacaccaagcacgaatgggaagcggtca
tctgatggatcactcagtcaggaagatgagtctggttctggttttggcaaggttggtgaa
ctccagggtgttgtggaccgtcaaaccgctgatctgggccagatgaaggagcgcatggct
gcgatggcatctcgaatcagtgagctggaggaagatgtggacactgcgagaaaagacctc
atcaaatctgaagacatgaatacacgattacagagagacctcagagaatctatggctcag
aaagatgatatggaagagaggatcaccactctagagaagcgctacctggcagctcagcgg
gaggctacgtccgtccacgacctcaatgacaagctggagaatgaagtcgctaacagggag
tccctgtttagacaaactgaagacagaaaccggcagcttcaagagaaactggaactagca
gagcagaagctgctgcagactatccgcaaagcagagactctgccagaggtggaagccgag
ctagcacaacgggtagctgccctcacaaaggcagaggaacgacacggtaatgtggaagag
agattgaggcagctggagtcccagttggaggagaagcaccaggaactgctcagggcaagg
caaagagagaagatgaatgaggagcacaacaagcgcctctctgagacagtggacaagctc
ctgtctgagtccaacgagagactccagcttcaccttaaagagaggatgtctgctctagag
gacaagaacgcgctcataagggaacttgagcacactaagaaactgattgaggagtctcac
catgaaaaggagcagcttttgattcagattgaaacgttgagggccgaaaatgagcagggc
aggagcagaagcaactcgttattacatggtcgatcgcagctgggaagcaccccagacttc
aggtatccggtgtctgcttcctcaatgatggacagtaactcagaccattatggtggtgct
cttgtgttaaggcggccccaaaaaggaagagtagcagcccttagagatgaaccatccaag
gtgcagactcttaatgaacaggagtgggagcgtgtccaacaggccaatgtacttgctaat
gtggcccaggctttcgagagtgatatggatgcctcggacctggaggaggatcgagagact
atcttcagctctgtcgatcttttgtcccctggtggtcaggcagatgcacagactctggcc
ttaatgctgcaggagcaacttgatgcgatcaacaatgaaatcagaatgattcaagaagag
aaggaaaacacagccatccgagctgaggaaattgagtacagggtgggcagtggtgacagc
cttggaggacgtttccgttcaataagctccttacagccttcactatctgccggctctcct
atgggcagcaactctcctccaggctctggccactccacaccaagacgtattcctcacagc
ccccatagagaattagaccggatgggtgtcatgaccctgcctagtgacctgcgcaagcac
cgcaggaagtcagctcaggatgacaaaaccactattcagtgtgagacatcaccccccacc
actcctcgctctatgcgcctaaacagggaagcaggttatgctgccagccacgaggacata
agagacattcgaggtcttggcatacaagatgggcagggtagcaaccccagcagcagtaac
agcagccaggactctctgaacaaggcagccaagaaaaaaagcattaagtcttccattgga
cgcctttttgggaagaaggagaaaggccggccgagtcttcctggaaaggactctcccagt
caaggtggcactcctgaagcagagaactcacctaaggacggcttgggaatgggcaccctg
ggaggccctgcagaaaaaaacagaaaactgcagaagaatccaaagacagggcatgaactg
ttagatgaggcgcgcaggcagggcctgccttttgcccaatgggatggaccaactgttgtc
gtttggcttgagctgtgggtgggcatgcctgcttggtatgtagctgcctgtcgtgcaaac
gtaaagagtggagccattatgtcagcactttccgacactgaaatccagagggagattggc
atcagcaaccctttgcatcgtctgaaacttcgtcttgccatccaggaaatcatgtcgctc
accagtccttctgcccctcccacctcaagaacgacgacaggaaacgtttgggtcacacat
gaagaaatggaaagtttggcagccacacctcctacggaggacgacgaaagtagctgggcc
cagacattggcatatggagacatgaatcatgaatggattggtaatgagtggttacccagc
ttgggtctaccacagtaccgctcatatttcatggagtccctggtggacgcccgcatgctc
gatcacctgaccaagaaagacctccggggacagctgaagatggttgacagtttccacagg
aacagttttcagtgcggagtaatgtgcttaaggaggctcaactatgaccggaaagagctg
gagaggagaagggaagagtgtcagctggagttcaatgatgtgctggtgtggagtaatgag
cgtttgataaattggattcaggctattgggctgaaagagtacagtgccaatctttatgaa
agtggtgttcatggggctctgctttctctggatgaaacctttgatcacaacaccctggca
ctcttgctgcagattcccacacaaaacactcaggcacgagcaactcttgagcgggagtac
aaccgtttgctggccattggtaccgacagaaggatggaagaggatgaggacaagaacttc
cggcgagctccctcatggcgaaagaagttcaggcccaaagacatgagggggatgcctttg
ggtgcatcagacactctgcctgccaacttcagagtgaccagcaacgcatcatctgcctcc
acccagccaaaaaggagcccaatggacggtaaccgctggtcagaagatgaaggggaattc
cctgctttcaagaccaggatgatgaactaa
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