Syngnathus scovelli (Gulf pipefish): 125968299
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Entry
125968299 CDS
T08785
Symbol
cpeb2
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 2 isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04114
Oocyte meiosis
sscv04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
125968299 (cpeb2)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
125968299 (cpeb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125968299 (cpeb2)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125968299 (cpeb2)
Factors involved in mRNA localization
Trans-acting binding proteins
125968299 (cpeb2)
mRNA cycle factors
P-body specific factors
125968299 (cpeb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
125968299
NCBI-ProteinID:
XP_049575250
LinkDB
All DBs
Position
10:10132833..10142903
Genome browser
AA seq
703 aa
AA seq
DB search
MQDEPAGVTRTLTPPSTDEEPASRCKVPADYEQRGFRPTWPARDLQFGRERQRRSGEFAP
EPAAASSPALDPREDVADAATPPSTSPPPTSVNPLRDLPMDSPVGHYVSNGNDYNMLSGG
LGAAFPEMQSTTGSGGSSSPSLPGFGTPWSVQTCGSSPPPPPLPAPPPPPAPPEPACTSG
DSSGSGVGFYTGMRSSSVNPAFFQGFSANPCSGMNVQGFGGPFSPQIRRSPISPQMHNQQ
GTFLQQRNNYNQHQPIMKQSPWGAHQGNGWSSGGVSWGRDHRKGAGAAGTAGQGGHASSP
LKKAFHSNVIAPPKFPRSATSLGPKSWLEDNVFRTDGNSNTLLPLQDRSRLYESLNMHSL
ESSLIDIMRAEQDPLKGRIGCLNQTADGLLMLNARSYGRRRGRSSLFPIDDNLLDDGHGN
QGVPGVLGSAGCYPHQNGERIERFSRKVFVGGLPPDIDEDEITSSFRRFGHLVVDWPHKA
ESKSYFPPKGYAFLLFQEETSVQALIEACMEEDGKLYLCVSSPTIKDKPVQIRPWNLSDS
DFVMDGSQPLDPRKTIFVGGVPRPLRAIELAMIMDRLYGGVCYAGIDTDPELKYPKGAGR
VAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCAN
VTCLQYYCEFCWANIHSRAGREFHKPLVKEGADRPRQIHFRWN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgagcctgcgggggtgacacgcactctgacaccgccgtccaccgacgaggag
cctgccagccgctgcaaggtgccagcggattacgagcagcgaggcttccgtccgacgtgg
cctgcccgtgaccttcaattcggtcgggaaagacagcggcgatccggagagttcgccccg
gaaccagcggccgcgtcgtcgcccgccctcgacccgcgcgaggacgtagccgatgccgcg
acaccaccatcaacatcgccgccgccgacttccgtgaatccgctccgcgacctcccgatg
gactcccccgtcggccactacgtcagcaacggcaatgactacaacatgttgtccggaggt
ctgggcgccgccttcccggagatgcagagcaccactggcagcggcggctcgtcgtcgccc
tctctcccgggcttcggcacgccttggtcggtgcagacgtgcggctcatcgccccctcct
ccgcctcttcctgctcccccgcctcctcccgctccacctgagcccgcctgcacctccggc
gacagcagtggcagcggcgtcggcttctacacggggatgcgttcgtcttccgtcaacccg
gccttcttccagggcttctcggctaatccgtgctccggaatgaacgtgcagggcttcggc
gggcccttctcgccgcagatccgccgctctcccatcagcccgcagatgcacaaccagcag
ggcaccttcctgcagcagaggaacaactacaaccaacatcagcctattatgaagcagtct
ccctggggggctcaccagggcaacggctggagctcgggtggcgtgtcctgggggcgcgac
catcgcaagggggcgggcgccgcgggcacggcaggccagggtggccacgcgtcgtcgccg
ctcaagaaggccttccacagcaacgtcatcgcgccacccaagttcccgcgctcggccacc
tcgctggggcctaagtcgtggctggaggacaacgtgtttcgcaccgacggcaacagtaac
actttgttgcccctgcaggaccgctccagattgtatgagagcctcaacatgcattcgctg
gagagctccctgattgacatcatgcgggccgagcaggatcctctgaaaggccgcattgga
tgcctgaaccagactgccgacgggctcctcatgcttaacgccaggagctatggcagacgt
cgagggcgctcttctcttttccccatcgacgacaatttgctggatgacggccacggcaac
cagggggttccgggggtcctgggctcggccggctgctacccgcatcagaacggcgagcgc
atcgaacgcttttcacgcaaggtgtttgtgggcgggttgccgcccgacatagacgaagat
gaaatcacctccagcttccgccgctttggtcacctggtggttgactggccgcacaaagct
gagagcaagtcctactttccacccaaaggttacgccttcctgctgttccaagaggagact
tccgtgcaagccctgattgaagcctgcatggaggaggatggcaagctctacttgtgtgtc
tccagccctaccatcaaggataaacctgtgcaaatccgcccgtggaacctgagcgacagc
gactttgtgatggacggatctcagcccctggacccccgcaagaccatttttgtgggaggc
gtccctcgtcccctgagagcaatcgaactggccatgatcatggaccgcctctacgggggc
gtctgctacgccgggatagacactgacccggagctcaagtaccccaaaggggcggggcgg
gttgctttctccaaccagcagagctacattgctgccatcagcgccagatttgtgcagctg
cagcatggtgacattgacaagcgggtggaggtgaagccgtacgtgctggatgaccagctg
tgcgacgagtgccagggcgctcgctgcggcggcaagtttgctcccttcttctgcgccaac
gtcacctgcttgcagtactactgcgagttctgctgggccaacatccactcacgcgccggc
cgtgagttccacaagcctctggtcaaggaaggcgccgaccgcccgcggcagatccacttc
cgttggaactag
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