Syngnathus scovelli (Gulf pipefish): 125968413
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Entry
125968413 CDS
T08785
Symbol
prom1b
Name
(RefSeq) prominin 1 b isoform X1
KO
K06532
prominin 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125968413 (prom1b)
04090 CD molecules [BR:
sscv04090
]
125968413 (prom1b)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125968413 (prom1b)
CD molecules [BR:
sscv04090
]
Proteins
125968413 (prom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
COG5_N
Cyt_bd_oxida_II
Peptidase_C11
DUF3587
COG6_N
PmrD
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
125968413
NCBI-ProteinID:
XP_049575395
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All DBs
Position
5:1688384..1705810
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AA seq
893 aa
AA seq
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MLWTRWLVLLLCWWGAVSATTTAENGQYELAKQGESRADPHRQRSPPPVEPLDFGFVPAA
VYDTHAYYEPGAIGILFHMVHAFLYAVQPNSFPKDLIVKVIQQNMGGIKFHEWRKPDNVV
LLLEGAYYELGFLVCATIGVLFVVLVPLVGMCFCVCRCCENCGGEMHQRQRKNADCRRGF
FTATLIATTIFIILGVLVAYAANHNMSSYIKNTRRLINTNIRDLKTFANNTPAQIEYMTA
QYTTAKNKVLSELDNIGPLLGGRIHSQLEKEVVPSLDTALRMAGVKVENAIKAMRETKEA
LESVSSSLQVLQEGTDQLKDSLSTERASLSNTLSDPACTNGAVSPSCNVIRASLFQLGIN
ADFSKLPDVDYALENVNTVLKTDLSNIIQKGYSSFNDTPRLVKEQTKNIVAALPRVKGML
DKIGNEINGFTKMFPVEASLANFTIFLTQGQKNIESYYAQIDQLDFYRWIGCVAVLCTVV
LILSFNILGLLCGTCGYDKQATPTTRGCLSNTGGNLLMAGVGFSFIFAWVLMAIVTALFL
IGGNVEKLLCEPLASRQLFQIIDTPFLVHPAKKNFLPGMLFQNPNIDLTLGSMYRECYDN
NGLYHALQLETMFNINSFLNRTVYNKDLANVFDSVEVDLQDISLLEQAGRDNLINFANTG
IGIIDYEAYLAEVNKGITLVDLLTFAVDLEGQADQLPRGALENALKGHASSIRQIHRELV
VPLEQAMKYVRARSTLNQSIKLLQKTSSDLPVKVTNILSALDASEYLISNNASHVVKQET
KNYVQSLVGYFKQYTNWVHDSLIAEVAQCKPISNIVDSMEIVACSFIADSVNTFWLGLGL
SSILLLPSIIISIKLAKYYRRMDTEDVFEDSSPYSDTLFRFPRASAPSICVDC
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggacacggtggctcgtcttgctgctctgctggtggggggccgtcagcgccacc
accacggccgagaacggccaatatgagctggccaaacaaggtgagtcgagagcggaccct
caccggcagcgctcgcccccgccggtggagccgctggattttggcttcgtcccggcggcg
gtttatgacacccacgcctactacgagcccggagccatcgggatactcttccatatggtc
cacgcttttctctacgcggtccagccgaattccttccccaaagatttaattgttaaagtc
attcaacaaaatatgggaggaatcaaatttcatgaatggagaaagccggacaacgtcgtc
cttcttctcgagggggcatactacgagttgggcttcctggtgtgcgcgaccatcggcgtc
ttgttcgtggtcctggttcccctggtgggcatgtgcttctgcgtttgtcgttgctgcgag
aattgcggcggggagatgcaccagagacaaaggaaaaacgccgactgccgccgaggcttc
ttcaccgccacgcttatcgccaccaccatctttatcatcctgggggtgctcgtggcctac
gcagccaaccacaacatgagctcctacatcaagaacactcggcggttaatcaacactaac
atcagagacttgaagacgttcgccaacaacacacctgcgcaaatcgaatacatgacagcg
cagtacacgacggccaaaaataaagtcctgtccgaacttgacaatattggacctttgctg
ggcgggaggattcacagtcagctggagaaggaagtggttccctcgctggatacggctttg
cgtatggcaggagtaaaagttgagaatgctatcaaagccatgcgtgagacaaaggaggcc
ctggagagcgtcagctcctcactgcaagtcctccaagaaggcacagaccagctcaaggac
agtctgtccaccgagcgagcttctctgtccaacaccttgtccgacccggcctgcaccaac
ggcgccgtgtcgccgagctgcaacgtcatccgcgcctcgcttttccaactcggcatcaac
gctgacttttcaaagctcccagatgtcgattacgccttggagaatgtcaacacggtcctg
aaaacggacctcagcaacattattcagaagggctactcgtccttcaatgacacgccgagg
ctggtcaaagaacaaaccaaaaacattgtagcagcgttacctcgagtgaaaggcatgctc
gataaaatcggcaacgagatcaacggcttcaccaagatgttcccggtggaggcgtcgctg
gccaacttcacaatcttcctcactcaggggcagaagaacattgagtcctattatgcacag
attgaccagctcgacttctacaggtggattggctgcgtggcagtgctgtgcacggtggtc
ctcatcctgtccttcaacatcctgggcctgctgtgcggcacatgcggctacgacaagcag
gccacgccaactactcgcggctgcctgtccaatacgggcgggaacctgctcatggccggc
gtaggcttctccttcatcttcgcctgggtgctgatggccatcgtcaccgcactgttcctc
atcgggggcaatgtggagaagctgctgtgtgaacccctggccagccggcagctgttccag
atcatagacacacctttcctggtccatccggccaagaagaacttcctccctggaatgctt
tttcagaacccaaacattgacttaactttggggagcatgtacagggagtgctacgataac
aacggcctatatcacgccctgcagcttgagaccatgtttaacatcaactccttcctcaac
agaacagtgtacaacaaggacctggccaatgtgtttgacagcgtggaggtggacctccag
gacatctcgctgctggagcaggcgggcagagacaacctcatcaattttgccaacacgggc
atcggaatcatcgattatgaagcatacctggctgaggtcaacaagggaatcacgctcgtg
gaccttctgacgtttgctgttgacctggagggccaagctgaccagcttccacgtggcgct
ctggagaacgcgctgaaaggtcacgctagcagtatccgacagattcacagagaactggtg
gtccccttggagcaggccatgaaatatgtccgtgccaggagcaccttgaatcaaagtata
aagcttctgcagaaaacctccagcgacctgccggtgaaggtgaccaacatcctgagcgcc
cttgatgcttcggagtacctcatcagtaacaatgcctcacatgtggtcaaacaggaaacc
aaaaactatgtccaaagcttggtgggttacttcaaacagtacacaaactgggttcacgac
tctctgattgcagaggtggctcagtgtaaacccatcagcaacattgtggacagcatggag
attgtcgcatgcagcttcattgctgactcagtgaataccttctggcttggactgggtctc
tccagcatcctcctgctccccagtatcatcatctccatcaaactggccaaatactacaga
aggatggacacggaggacgtgtttgaagatagctccccctatagtgacaccctgttccga
ttccctcgagcctcggctccctcaatctgcgtcgactgctga
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