KEGG   Syngnathus scovelli (Gulf pipefish): 125968429
Entry
125968429         CDS       T08785                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sscv03041]
    125968429
Spliceosome [BR:sscv03041]
 Complex B
  Other components
   Complex B specific factors
    125968429
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 LisH_TPL WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Mala_s_1-like Beta-prop_VPS8 Beta-prop_IP5PC_F VPS8_N DUF7165 Beta-prop_ELP1_2nd PD40 CXCXC
Other DBs
NCBI-GeneID: 125968429
NCBI-ProteinID: XP_049575420
LinkDB
Position
5:complement(7265282..7271843)
AA seq 510 aa
MAMEMEPSDVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVESIDSFIADIQKGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERYSHLEHL
LTLSYFDPREGYPKGSSKEKRRRAIAEELVREVSVVPPSRLMGLLEEVGSLRLNSPESLS
PEMTIESPCKKDIYAEKETFPTQLYRHIKFGRRSHVECARFSPDGKYLISGSVDGFIEVW
NFHTGNISKDLKYQAQDSFMMMDDAVLCVCFSQDSDLLATGAQNGKIKVWKIQSGLCLRR
FEHAHNQGVTCLSFSKDSNQILSASFDRTIRIHELRSGQTLKELNGHLSFVNDASFTQDG
FHIISASSDGTVKIWNSKTCECIHTFKSLSRASDVPVNNVITLPQNPQLFVVCNHSSTVV
VMNTQGQTVKTFSADKKSRAKFVCSAVSPRGEWIYCVGEDLVLYCFNYATARLEKTLTVH
EKDIIGITHHPHENLIATYSVDGLLRLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggctatggagatggagccctcggatgtcattcgccttataatgcaatacctaaaggag
aacaacctctacaggaccttgaccacgttacaggaagagacaacagtctcgctcaatacc
gtggagagtatcgacagcttcatcgcagacatccaaaaaggccactgggactcagtcttg
ctagcaattgaatccctcaaattgcctgacaacacactaattgacctttatgaacaggtg
gtaatggagctgattgagatgagggaggtgggcgctgcccgttcactcctcagacaaacc
gacccgatgatcatgttgaagcagacccagcccgagaggtacagccacctggaacacctg
ctcacactctcctattttgacccgcgtgagggatacccaaaaggtagcagcaaggagaag
cgacgtagagccattgcagaggagctggtgagggaggtcagtgtggtgccgccatcccgc
ctcatgggcctcctggaagaagtcgggtcgttgagactgaactcaccagagagcctctca
cctgaaatgaccatcgagagcccatgcaaaaaggacatatatgcagagaaagagactttt
ccaacccaactgtaccgtcacattaagtttggacgtcggtcacatgtggaatgtgcccgt
ttctctcccgatggcaaatacttaatctctggctcggtggatggattcattgaagtgtgg
aactttcacacgggcaacataagcaaggatttaaagtaccaggcccaagatagttttatg
atgatggacgatgcagtgttatgtgtgtgcttcagccaggattcagatctacttgccacc
ggcgctcagaatggaaaaataaaggtgtggaagatccagagtggcctgtgcctgcgcagg
tttgagcatgcacacaaccaaggtgtgacctgtctgagtttctccaaggatagcaaccaa
atcctcagtgcatcttttgaccgcaccatcaggatccatgagctgcgttcgggccaaaca
ctgaaggagttaaatggacatctgtcgtttgtgaatgatgcatcgttcacacaggatgga
tttcatatcatcagcgcatcatcggacggtactgttaagatttggaacagcaaaacttgt
gaatgcatccacacgtttaagtctctgtcgcgggcttcggatgtccccgtgaacaacgtg
atcactcttccccaaaatccacagctctttgtggtttgcaaccattccagcacggttgtt
gtcatgaacacgcagggtcagactgtcaagacgtttagtgcagataaaaagtcgagagca
aagtttgtgtgcagcgcagtgtccccgcgaggtgagtggatttactgcgtaggagaggac
ttggtgctctattgcttcaactacgcgacagcaagactggagaaaactctgacggtccat
gagaaagatataattggcatcactcaccacccacatgagaatctgattgctacttacagc
gtggatggcctcctgaggctgtggaagccttag

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