Syngnathus scovelli (Gulf pipefish): 125968444
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Entry
125968444 CDS
T08785
Symbol
chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125968444 (chrna6)
04082 Neuroactive ligand signaling
125968444 (chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125968444 (chrna6)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125968444 (chrna6)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Red1
Pyr4-TMTC
Motif
Other DBs
NCBI-GeneID:
125968444
NCBI-ProteinID:
XP_049575446
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Position
5:10861989..10877866
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AA seq
519 aa
AA seq
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MHPVVKWTWVLLLGGLVTQDCLASKAEDRLFRKLFRRYNQFIRPVENVSDPVTVEFEVSI
SQLVKVDEVNQIMETNLWLRHIWNDYKLRWMPDEFDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTITWIPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPGWVRTVFLKVLPRIMLMRRPTDEVSKAGG
LENSGEAGGAGGGGGGGGVKKRKNNLTQVGGGSLNCLEIGDTTMSSMEGCAGKKCSWPCQ
HGQESPESPTTVKTTRQMSPQSINSVVAFSVVSPEIKQAIESVKYIAENMRSRNKAKEVE
DDWKYVAMVIDRIFLWVFVTVCVLGTVGLFMQPLFGFVS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcatccagttgtaaaatggacttgggttcttcttcttggaggtttggtgacccaagat
tgccttgcatctaaagcagaagaccgcctcttcaggaagctttttaggagatacaaccag
ttcatcagaccagtggagaacgtctcagaccctgtcacggtggagtttgaagtctccatc
tcacagctggtcaaagttgatgaggtcaatcaaatcatggaaacaaatttatggctcagg
catatttggaatgattacaagctgcgatggatgcccgatgagtttgatggaattgagttc
atccgagtcccatcaaataagatctggagacctgacattgttctctacaacaatgctgtt
ggggatttcctggtagaggacaaaaccaaggcactgctgaagtttgatggtaccattacc
tggattcctcctgcaattttcaaatcctcctgccctatggacatcacctacttcccattt
gactatcagaactgctcaatgaagtttggctcatggacttatgacaaagccaagattgac
cttgtacttattggatctaaggtcaacctcaaagacttctgggagagcggtgaatgggag
atcattgatgctccaggctacaagcacgacatcaagtacaactgctgcgaggaaatctac
ccggacatcacttattccttctacatccgtcgactgccactcttctacaccatcaacctc
atcatcccctgcctcctcatctctttcctcacagtgctggttttctatctcccgtctgac
tgcggagagaaggtcacgctctgtatctccgtcctgctctccctcactgtatttctactc
gtgatcaccgagaccatcccctccacatctctggtcatcccgctgattggagagtatctg
ctcttcaccatgatcttcgtcaccctcagcattgtcattacggttttcgtcttgaacgtg
cactaccgcacccccatgacgcacaccatgcccggatgggtgcggacagtgtttcttaaa
gtgctgccgaggattatgttgatgcggagaccaactgatgaagtcagcaaggctggaggg
ttggaaaacagtggggaagcaggaggagctggagggggaggaggaggcggtggagtcaag
aagaggaagaataacttgacacaggttggtggcggttccctaaattgtctagagattggg
gacaccaccatgtcctccatggaaggttgtgctgggaaaaaatgctcttggccttgccag
cacgggcaggaaagtcctgaatcaccaacaactgtaaaaacgacacgtcagatgagtcca
cagagcataaattcagtggtggccttctctgttgtgtcacctgagattaagcaggccatc
gagagcgtcaaatacatcgctgagaacatgaggagccgaaacaaagccaaagaggtggaa
gacgactggaagtacgtcgccatggtgattgacagaatcttcctatgggtgtttgtgact
gtgtgtgtcctggggaccgtgggcctcttcatgcaacctctttttggatttgtctcgtaa
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