Syngnathus scovelli (Gulf pipefish): 125968467
Help
Entry
125968467 CDS
T08785
Name
(RefSeq) receptor-type tyrosine-protein phosphatase delta isoform X1
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125968467
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125968467
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125968467
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
125968467
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
125968467
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
Type II RPTP family
125968467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_2
ig
PTP-SAK
V-set
Tc-R-P
Interfer-bind
DSPc
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
125968467
NCBI-ProteinID:
XP_049575501
LinkDB
All DBs
Position
5:complement(5365322..5482417)
Genome browser
AA seq
1952 aa
AA seq
DB search
MHVSKYPTMHSASPGLILLSFLFFADADSPPRFTRTPEDQTGVQGGVASFVCQAAGEPQP
KIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECHASNSAGELTASTRL
SVLREDQLPSGFPTIDMGPQLKVVERSRTATMLCAASGNPDPEITWFKDFLPVNTSNNNG
RIKQLRSESFGGTPIRGALQIEMSEESDQGKYECVATNSDGTRYSTPANLYVRELREVRR
VPPRFSIPPADSEIMPGGNVNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELTD
VRQSNNYTCVAMSTLGVIEAVAQIIVKALPKAPGTPVVTERTATSITLTWDSGNPEPVSY
YIIQHRSKGSEDPYKEIDSIATTRYSVGGLSPYSHYDFRVAAVNTIGQGPSSEVVEARTA
EQAPSSPPRQVRGRMLSTTTAIIHWDEPEEPNGQVVGYRVYYTSDNMLPVNQWEKQMVRS
ANFITIQSLTPNKTYYIRVLAFTSVGDGPLSQDLQIIAKTGVPSQPSEFKGEAKSETSIL
LSWIAPPQGGPDNQITGYELVYRRADDTEEKKVSFEPTSSYLLRNLKPFSAYTFQLAARS
KHGIGAYTNEISIDTPQTLPSAPPQDITCTSPTSTSILVSWAPPPAEFQNGVITGYAVQY
STTGVNKTSKRIDGIPKEGSPYLLDNLEKWTEYGITVRAQTEAGDGPESLQLIIRTEEDV
PSGPPRGVDAETVNSSAIRVKWRAPAPELQHGQIRGYQVHYVRMNYGEPQGPPSIKDILI
EDSEWEYDQSAQYEALLGNLKADTSYSISVGAYTAKGDGARSKPVAICTALPLPEKPKLM
VSATDSGTALLQWYPPPNPLTPLLGYRLTFGRVDVLPFTVVEFPTKESLYAAQDIHMGAN
YIFRLSARNKMGYGEEAVKEVTTPEGSPTGYPENIISEEMSANSLRLTWKSVPLIEQNGK
IVKYSVLYKDINSRGNSSEIVVPAPGSSVLLEGLSADTVYDVRVCAYTTVGPGPYSPGVQ
FRTQRLDQVFATNFKVKAAMKNSVLLSWEVRDKNPTQPFTILYGKGQSVEVDGKQTQKLI
TGLQPDTLYSFLLTNRANSAGGLQHRVTATTAPDILKSKPVVVGKTNADGMVTVQLPSVQ
TAAKVKGYYLVVVPLKKQRGGKFSNPWEDPDQMNLDELLREINRTSVSRALRIRRQTGQS
DPRAYVSANFKTLPPEFTLGDGQNYGDFRNRPLQNGQEYVFFVLALLDLSENTMFSTSPY
SDPVTSSGVDPQPIVDEEEGLLWVVGPVLAVIFIVCIVIAILLFKSKPDRKRAEAEGRKG
SFPCSKAMSSHHPTDPVELRRINFQTPAYRVSVYRGYRRLSSMASHPPVPVSELADNIER
LKANDNLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILSGIEGVPGS
DYVNANYIDGYRRQNAYIATQGSLPETFGDFWRMVWEQHTANIIMMTKLEEKSRMPSYFF
SKVKCDQYWPTRGTETYGLIQVTLLDTVELATYSVRTFALYKSGSNEKREVRHFQFTAWP
DHGVPEHPTPFLAFLRRVKACNPADAGPMIVHCSAGVGRTGCFIVIDAMAERIKHEKTVD
IYGHVTLMRSQRNYMVQTEDQYIFIYDALLEAVTCGNTEVAARNLYSYIQRLTQIEPGDN
VTGMELEFKRLASAKAHTSRFVSANLPCNKFKNKLVNIMPYETTRVPLQPIRGVEGSDYI
NASFIDGYRQQKAYIATQGPLAETTEDYWRMLWEHNSTIVVMLTKLREMGREKCHQYWPA
ERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGF
IDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLR
TQRPATVQTEDQYQFCYRASLEYLGSFDHYAT
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgtcgaaatacccaacaatgcactctgccagtccgggtctgatcctcctcagt
ttccttttcttcgccgatgctgactcccctccacgatttacccgaaccccagaagaccag
acaggagtccaaggcggcgtggcatcgttcgtgtgccaggccgccggcgagccgcagccc
aagattgtgtggaacaagaaaggcaaaaaagtcagcaatcagagatttgaggtgattgaa
tttgacgacgggtctggctcagtcctgagaatccagcctctccggacccccagagatgag
gctatttacgaatgccacgcctctaactcggcaggagagctcacggcctccacccggcta
agcgtgctaagagaggaccagctgccttcggggttccccacaatagatatgggtccccag
ctgaaagtggtagaacgctctcggaccgctaccatgctctgcgcggcgagcggaaaccct
gacccagaaattacttggttcaaggatttcctgccagtcaacacatccaataacaatgga
cgaatcaagcagctgcgctcagagtcctttggtggcacgcccatacgaggcgcactgcag
atcgaaatgagcgaagagtctgaccagggcaagtatgagtgtgttgccaccaacagcgat
ggaactcgctattccaccccagccaacctctacgtacgagagctccgagaagtgcgtcgc
gtcccccctcggttctctatcccgccggcggacagcgagatcatgccagggggcaacgtc
aacatcacctgcgtggcggtgggctcgcccatgccctatgtaaagtggatgctgggagcc
gaggacctgaccccagaggatgatatgcccatcggccgtaatgtccttgaattgacggat
gtacgccagtccaacaattacacctgcgttgccatgtcaacgcttggcgttattgaggct
gtggcgcagattattgtgaaagctctcccaaaggctcccggcacacccgtggtgaccgaa
agaactgcaacaagcatcactctcacctgggattctggcaaccccgaacctgtctcctat
tacatcatacaacaccgttccaaaggctccgaggacccctataaagagattgatagcatc
gccaccacccgctacagtgtgggtggcctgagcccttactcccattatgacttccgcgtg
gcagctgttaacaccatcggccagggtccctccagcgaagtggtggaggctcgcacagca
gagcaggcaccctcctcacctccccgacaagtcagaggtcgaatgttgagcaccacaacg
gcaatcatccattgggatgagccagaggaaccaaatgggcaggtagtgggctacagggtc
tactacacatcagacaacatgttgccagtgaaccagtgggagaagcagatggtgcggagc
gccaactttatcaccattcagagcttgactcctaacaagacatattacatcagagtgttg
gcgttcacctccgttggcgatggtcctctttcccaggacctgcagattattgccaagact
ggcgtcccatcgcaaccttcggagttcaaaggagaggccaaatctgagacgagtattttg
ttatcctggatagcgccaccccagggtggccctgacaaccagatcacgggatatgaactg
gtttatcgacgggcagatgatactgaggagaagaaagtaagctttgagccaacaagctcc
tacctgttgaggaacctcaagcctttctcggcctacactttccaattggccgctcgtagc
aaacatggcattggcgcatataccaacgagatttccattgacacaccccagacacttcct
tcagcacctccccaggacataacatgcaccagccccacttctaccagcatcctggtaagt
tgggcaccaccacctgcggagtttcagaacggcgtcattacgggctacgccgtccagtat
tccactaccggggtcaacaaaacatccaaaaggattgacggcattccaaaggaaggttct
ccgtacctcttggataacctagagaaatggaccgaatacggaattacagtacgggcgcag
acggaagctggcgacggacctgagagtttacagctgattatccgcaccgaggaagatgtt
ccaagtggtcctcctcgaggggtggacgcagagacagtgaactcctcagccattagggtg
aaatggcgagcgccagcccctgagctgcagcacggtcagatccgaggctaccaagtccac
tacgtgaggatgaactacggcgagcctcagggtccgccctccattaaggacatccttata
gaggactcagagtgggaatacgaccaatcagctcaatacgaggctcttctcggaaacttg
aaggccgacacttcctactctatctcggtaggagcttacactgccaaaggagatggtgcc
cgcagcaaacctgttgccatctgcactgctctgccattgcctgaaaagcccaaactaatg
gtgagcgcaactgactcgggcaccgctctgcttcagtggtacccgccgccaaatccccta
acgccactcctgggttaccgcctcacttttggccgtgtcgacgtccttccattcactgtg
gtagagttccccaccaaggagagcctctacgctgctcaggatatccatatgggtgccaac
tacattttcagactctccgcccgtaacaaaatgggctatggagaagaggcagtgaaagaa
gtgaccacgcctgaaggctccccaaccggatacccggaaaatatcatctcggaggagatg
tctgccaactccctccgcttgacgtggaaatcagtgccactcattgagcaaaacggaaaa
attgtcaaatactcagtgctgtacaaggatataaacagtcggggcaattcctcggaaatt
gtggtgcccgctccggggtcaagtgttttgttggagggtctgagtgccgatacggtgtat
gatgtcagggtgtgcgcgtacacgactgtcgggcccggtccgtacagccccggtgtccag
tttaggacgcagcggctagaccaagtttttgccaccaacttcaaagtgaaggccgccatg
aagaattctgttctgttatcctgggaggttcgagacaagaatcctacccagccattcact
atcctctacggaaaaggccagtcggtagaagtggatggcaagcagactcagaagctgatc
actgggttgcagcctgacaccctttactcattcttgcttaccaaccgggccaacagcgcc
gggggccttcagcaccgcgtcaccgccactactgctccagacatcctgaaaagcaaaccc
gtggtggtgggaaagaccaatgccgatggcatggtgaccgtccaacttccatctgtgcag
acggcagctaaagtcaagggttattatctggtggtggtgccactaaagaagcaacgagga
gggaagttctcgaatccatgggaggacccagaccagatgaatttagatgagttgctgaga
gagattaaccgaaccagcgtgagccgagccctccgtatccgcagacaaaccggccaatca
gatccaagagcttatgtcagcgctaactttaaaaccctcccccctgagttcacgctgggt
gatgggcaaaactacggcgacttccggaaccgtccattgcagaacggccaggaatatgtg
ttctttgtgctcgccctgcttgacctttcggagaacactatgttctccactagcccgtat
tctgatcccgtgacgtcatcaggtgtggacccgcagccaattgtggatgaggaagagggt
ctcttgtgggtggttggtccagtgttggccgttatcttcatcgtgtgtattgtcattgcc
atccttctcttcaaaagcaaacctgacaggaaacgagccgaagccgagggcaggaagggc
agtttcccctgcagcaaagccatgtcgtctcaccatcccactgaccctgtggagttgcgt
cgaatcaacttccagactccagcctaccgtgtatcagtgtaccgtggttatcgacgtttg
tcaagcatggcaagtcacccacccgtccccgtctcggagctggcagataacattgagcgc
ctcaaagcaaacgacaatctcaagttctcacaagagtacgagtcgattgaccccggtcaa
caattcacctgggagaactccaacttggaggtcaacaaaccaaagaaccgctacgctaac
gtcattgcctacgaccattccagggtgatactctctggcatcgaaggtgtcccagggagt
gactacgtcaacgctaactatattgatggctaccggcgtcaaaatgcctacatcgccact
cagggttcccttccggagacctttggggacttctggaggatggtgtgggagcagcataca
gccaatattatcatgatgaccaagctggaggagaagtcaaggatgccctcttatttcttc
tctaaggtgaagtgtgaccagtactggccaacacgaggcacggaaacttacggcctcatc
caggtcactctgctggatacggtggagctggcgacttactctgtccggacctttgcgctt
tacaagagtggctccaatgagaagcgtgaggttcgtcatttccaattcacagcttggccg
gaccacggggtacctgagcaccccactcccttcctggccttcttgagaagggtcaaggcc
tgcaaccctgcagatgcagggccaatgatcgtccactgcagtgccggagtgggccgcaca
ggttgcttcatcgtgatcgacgccatggcggaacgaatcaagcacgagaagacggttgac
atctacggccacgtcacgctcatgcgctcgcagaggaactacatggtccagacggaggac
cagtacatcttcatctatgacgcgctgctggaggccgtgacctgcgggaacacagaggtc
gccgccaggaacttgtattcatacatccagaggctgacgcagattgaacctggcgacaac
gtcaccggcatggaattggagttcaagcgtctggccagtgccaaggcccacacgtcgcgc
ttcgtcagtgccaacctaccatgcaacaagttcaagaacaagcttgtcaacatcatgccc
tacgagaccacacgcgtgcccctgcagccaatcagaggggtggaggggtcggactacatc
aacgccagcttcatcgatggctataggcaacagaaggcttacatagcgacacaaggcccg
ttggccgagaccaccgaggactactggagaatgctgtgggaacacaactccaccatcgtt
gtcatgctcaccaaactgagggagatgggacgggagaaatgtcaccagtattggcccgca
gagcgctcagctcggtaccagtactttgtggtggatcccatggccgagtacaacatgcct
caatacatcctccgagaattcaaagtcacggacgccagagatggccaatcgcggacggtt
cgtcaattccagttcactgattggccagaacaaggagtgccaaagtcaggggagggattc
attgatttcattggacaagtgcataaaactaaagaacagtttggccaggatggaccaata
actgtgcactgcagtgccggagtgggccggacaggcgtgttcatcacgctgagcatcgtg
ctggagagaatgcggtacgagggcgtggtggacatcttccagacggtcaagatgctgcgc
acgcagagacctgccaccgttcaaacagaggaccagtaccagttctgctaccgcgccagt
ctggagtacctcggaagctttgatcactatgcaacataa
DBGET
integrated database retrieval system
