Syngnathus scovelli (Gulf pipefish): 125968480
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Entry
125968480 CDS
T08785
Symbol
pex6
Name
(RefSeq) peroxisomal ATPase PEX6
KO
K13339
peroxin-6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125968480 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125968480 (pex6)
Membrane trafficking [BR:
sscv04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
125968480 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_22
AAA_33
TIP49
RuvB_N
Rad17
DUF815
AAA_25
RNA_helicase
NPHP3_N
AAA_5
Mg_chelatase
AAA_24
nSTAND3
AAA_7
Sigma54_activat
AAA_28
AAA_18
TsaE
AAA_14
Parvo_NS1
AAA_17
IstB_IS21
SLFN-g3_helicase
PhoH
Sigma54_activ_2
AAA_2
Motif
Other DBs
NCBI-GeneID:
125968480
NCBI-ProteinID:
XP_049575550
LinkDB
All DBs
Position
5:complement(129177..135566)
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AA seq
1028 aa
AA seq
DB search
MAAQVELLRLEPFPDHASPLDVLGTEWQLRSLFRDHAGPPTVLFTPRRPPSSPRQPAVLL
RLRALSGEEVAAAAAAGFGRAAAACPPPGPGSVRLFASGFLLRIRGFPTAGIRGIAWPVL
PVNLDEVVLGVRGGRSMARDDADGLAAKLLELCRDESCLLARRGEPLLGDRPGQIPDVLV
LSCCPVTQGRVTPRTAVILADRPDAAGPGPPSRELRLCASDFAHRAARLGGDCSLLDRRL
GLSGVPEEPERRLDVRVTDVRRWLEADDGRGDADPDGSLYVGGRTLLRLGLFDGEWVELR
STGPAGRWRAAVLVAIRSDQAGDGACVSETLWFNLTGGRQSVGAACRIRLRRRRRQPPSR
DGPGGSETSRGSAPPPPAGELHLRPVAAPAERLPNRYDDLLAAHFAVPRLVALGDVLLVP
ARNHPDLLEDGQRCRALLFLVQRVCPADQTEQEGDGLYLADRTHTSLFTGPPVNVSAPRS
AAPWSGPSPPGLERAVDAIGRILGPHRHGGSLPARRLLVHGPAGSGKATAVAASSSRLHL
QLIRVDCVGVCGDTPAATEARLTSLLERADTFQPCVLLLKNLQLLLQTRGGANDSRVQAA
LCHLLRNAPDRVAVVATVREARGLPAGVASAFVHRVALESPGEGGRRAILTQLSRDVGLE
RDVDLETLAKVTAGLALGDLRALLVEAGRAACRRLLLARPARRQEDLCSSGVNVRQRDFL
SALQTLRDAQSEAAGAPRIPSVRWEDVGGLEQVKKDILDTVQLPLRCPQLSSLRLSRTGV
LLYGPPGTGKTLLAKAVATECSMTFLSVKGPELLNMYVGQSEENVREVFQRARSAAPCVV
FFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDALNASSRVFVIGATNRPDLLDRSLLR
PGRFDKLVYVGINADRASQLQVLRAVLRSFHLDASVDPQQVLERCPARTSGADLYALCSD
AMTAAVKRKVDAIHRGLDSEESPLRLTMADFGVALRDFQPSLSSEEATRYRGVGHDEAVA
NPPLSGGS
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtggaattattgaggctggagcctttccctgaccacgcgagtcccctg
gacgtgctcggcaccgaatggcagctacgtagcctttttcgcgaccacgcggggcccccg
accgtcctgttcaccccgagacggcctccttcgagccctcgccagcccgccgtcctgctt
cgtcttcgggcgctcagcggtgaagaggtggctgcggcggcggcggcgggcttcggccga
gccgcggccgcctgtcccccgccggggccgggctcggtgaggctctttgccagcggcttc
ttgctgcggatccgcggcttcccgacggcggggatccgcggtattgcgtggccagtgctg
cccgtaaacttggacgaggtggtgctgggtgtccgcggaggacgctctatggcgcgggac
gacgccgacgggctcgccgcgaagctgctggagctctgccgggatgaaagctgtctgctg
gcccggcgaggagagccgctgctcggggaccggccgggacagatacccgacgtgctggtg
ctgtcgtgctgcccggtcactcagggtcgcgtcacgccccgtaccgccgtgattctggcc
gaccggccggacgcggccgggccgggcccgccctcgagggagctccgcctgtgcgcttcg
gactttgctcatcgcgccgcccgcctgggaggggactgctcgctcctggaccggcgtctg
gggctcagcggcgtcccggaggagcccgagcggcggctggacgtgcgcgtgacggacgtg
aggcggtggctggaggcagacgacggccgcggcgatgccgacccggacggcagtctttac
gttggcgggcgcacgctgctcaggctggggctgtttgacggcgagtgggtggagctgcgg
tcgacgggcccggcgggcagatggcgagcggccgtcctcgtcgccatccgctcggaccag
gcgggcgacggcgcctgtgtgtcggagacgttgtggttcaacctgacgggaggacggcaa
agcgtgggcgccgcctgccgcatcaggctcaggaggcggcggcggcaaccgccgtcccgg
gatggccccggcggctccgagacttcccgcggctcggccccgccgccgccggccggcgag
cttcacctgcggccggtggcggccccggccgagcggctgccgaatcgctacgacgacctg
ctggccgcgcacttcgccgtccccaggctggtggcgctgggggacgttcttctggttcct
gcccgcaaccacccggacctgctggaggacggccagaggtgccgggcactgttgtttttg
gtgcagcgggtgtgtcctgctgaccagacggaacaagaaggggatgggctttatctggcc
gacagaacgcacacgtccctcttcacggggccgccggtcaacgtctcggcgccccgcagc
gcagcgccgtggagcggcccatccccgccgggtctagagcgcgcggtggacgccatcgga
cgtatcctcggcccgcaccgacacgggggctccctcccggcgcgcaggctcctggtccat
gggccggcgggaagcggcaaagcaacagcagtggcggcgtcgagttccagactgcacctc
cagctgatcagggtggactgtgtcggcgtgtgcggcgacacgcccgccgctacagaggcg
cggctgacttccttgttggagcgggccgacacctttcagccttgcgtccttttgctgaag
aacctgcagctcctcttgcagactcgcgggggcgccaacgactcccgcgtccaggcggcc
ctctgccacctgctccgtaatgcccccgacagggtggcggtggtggcgaccgtccgcgaa
gctcgtgggctgcccgccggcgtcgcgtctgcgtttgtccaccgggtggcgttggagagc
cccggcgagggcgggcgccgggcaattctaactcagctgagtagggacgttggcctcgaa
cgcgacgtcgacctggagacgctcgccaaagtcacggctggtttggccttgggtgacttg
cgcgccctgctggtggaggccggccgtgcggcgtgcagacggctgctcctggctcgtccc
gcccggcgccaggaggacttgtgctccagcggcgtgaacgtccgtcagcgggacttcctg
tcggctctgcagaccttgcgggacgcccagtcagaggccgctggcgcccccaggattccg
tccgtgcgctgggaggatgtgggcggcctggagcaggtgaagaaggacatcctggacacg
gtccagcttcctctacggtgcccgcagctctcgtccctcaggctgagtcgcaccggcgtt
ctgctctacgggcctccgggcacgggcaagactctgctggccaaggccgtggccaccgaa
tgctccatgaccttcctcagcgtgaaaggtccggagctgctcaacatgtacgtgggtcag
agcgaggagaacgtccgagaagtgtttcagagagcccgctcggcagcgccctgcgtggtc
ttctttgatgaactggactctctggcgcccagcagggggcgcagcggagactccggcggg
gtgatggacagggtggtgtctcagctgctcgccgagctggacgctctgaacgcctccagc
cgagtatttgtcatcggcgccaccaaccgacccgacctgctcgatcggtccctgctcagg
cccggaaggtttgacaagctggtctacgtggggatcaacgcagaccgcgcctcccagctg
caagtgctccgcgccgtcctccgcagcttccacctggacgcctcggtggacccgcagcag
gtgttggagcgttgccccgcccgcaccagcggcgccgacctgtacgcgctgtgctcggac
gccatgacggccgccgtcaagaggaaggtggacgccatccatcgcggtttggactccgag
gagtcgccgctgcgcctcaccatggcggactttggcgtggcgctgcgtgacttccagcct
tcgctgtcttcagaggaggccacgcgataccgaggcgtcgggcatgatgaggctgtggcc
aacccgccgctgtcggggggatcctag
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