Syngnathus scovelli (Gulf pipefish): 125968492
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Entry
125968492 CDS
T08785
Name
(RefSeq) calpain-2 catalytic subunit isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04141
Protein processing in endoplasmic reticulum
sscv04210
Apoptosis
sscv04217
Necroptosis
sscv04218
Cellular senescence
sscv04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125968492
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125968492
04217 Necroptosis
125968492
04218 Cellular senescence
125968492
09144 Cellular community - eukaryotes
04510 Focal adhesion
125968492
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125968492
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
125968492
Peptidases and inhibitors [BR:
sscv01002
]
Cysteine peptidases
Family C2: calpain family
125968492
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Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
DUF6553
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
125968492
NCBI-ProteinID:
XP_049575596
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All DBs
Position
5:complement(87310..93407)
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AA seq
697 aa
AA seq
DB search
MSGVASTLAKKRAMAAGFGSNQRAVPFLNQNFGALRAQCLSSGRLFCDPTFPAAPEALGF
KELGRNSYKTRGVTWKRPTELVSSPEFIVGGATRTDICQGALGDCWLLAAIASLTLNEYV
MARVVPDDQSFHDNYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELLFVHSAEGREFWSAL
LEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAENFDLQRAPADLFEILQKALEAGALLGC
SIDITSAADSEAVTRQKLVKGHAYSLTGAVEVNYRGRQEKLVRVRNPWGQVEWTGAWSDG
SSEWDSVQGDCPHANAEDGEFWMSYRDFLRHYSRVEVCTLTPDTILDDSVKHWSVNKFDG
SWRRGSTAGGCRNHAYTFWMNPQFVIKLDPEDDDPDDGEVGCSFVLGLIQKNRRKLRKQG
EDMHTIGFAIYELPRQFHGQQQVHLDKNFFLTHAQTARSETFINLREVSTRFKLPPGEYL
VVPSTFEPHLDGDFCIRVFSEKQSQTVPFDDPVSADLDDETVPEEEVDAAFRGLFAKLAG
PDMEISAAELRAIMNKIVAKRSDIKTSGFSMETCRVMVNLMDESSNGKLGLSEFATLWKK
VQRYLSIYKKNDTDNSGTMSTPEMRVAFKDAGFTLNNAIYQLLVARYAEPDLTLDFDNFV
GCLMRLEIMFRIFKKFDPNDSGSIQLNFNEWLNFSMI
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgtggcgtccaccctggccaagaagcgcgccatggcggcgggcttcggctcc
aatcagcgggccgtccccttcctcaaccagaacttcggcgccctgcgggcccagtgcctg
agcagcggcaggctgttctgcgaccccaccttcccggctgcccccgaagccctcggcttc
aaagagctcggacgcaactcttacaagacccgcggggtcacctggaagaggcccacggag
ctggtgtcctcacctgaattcatcgtgggcggagccaccaggaccgacatctgccagggg
gcgctcggtgactgttggctgttggcggccatcgcgtcgctgaccctcaacgagtatgtg
atggctcgcgtcgttcccgacgaccaaagctttcacgacaactatgccgggatctttcat
ttccagttttggcagtttggcgagtgggtggacgtggtgatcgacgaccgccttcccgtg
aaagacggcgagcttctgttcgtgcactcggcggagggtcgtgagttttggagtgctctt
ctagagaaggcctacgccaaggtgaacggctgctacgaggccctgtcggggggctccacc
acggagggcttcgaggacttcaccgggggcatcgccgagaacttcgacctccaacgagcc
cccgccgacctctttgaaatcctgcaaaaggccttggaagcgggggccctcctgggctgc
tccattgacatcaccagcgcggctgactcggaggcggtgacgcgtcagaagctggtcaaa
ggtcacgcctactccctgacgggtgccgtggaggtcaactaccgagggcgtcaggagaag
ctcgtccgtgtcaggaacccgtggggtcaagtggagtggaccggtgcctggagtgacggg
tcgtccgagtgggactcggtgcagggagactgtccccatgccaacgccgaggacggagaa
ttctggatgtcgtaccgagacttcctgcgtcactactcccgcgtggaggtgtgcactttg
acccccgacaccatcttggacgactcggtgaagcactggagcgtcaacaagttcgacggc
tcgtggcggcgcggctccacggccggcggctgcaggaaccacgcctacaccttctggatg
aacccgcagttcgtcatcaagttggaccccgaggacgatgacccggacgacggcgaggtg
ggatgcagctttgtgttgggcttgatccagaagaaccgaagaaagctcaggaagcagggc
gaggacatgcacaccatcggattcgccatctacgagcttcccagacagttccacggccag
cagcaagtgcacctggacaagaacttcttcctgacgcacgctcagacggctcgctcggag
accttcatcaacctgcgcgaggtcagcaccaggttcaagctgccgcctggcgagtacctg
gtggtgccctccaccttcgagccccacctcgacggcgacttctgcatacgcgtcttctcc
gagaagcaaagccagaccgtgccctttgacgacccggtcagcgcagaccttgatgatgaa
accgttccggaggaggaggtggacgcggctttccgaggcctgttcgccaagctggcggga
ccggacatggagatctccgcggcggaactgcgggccatcatgaacaagatcgtcgccaag
cgaagtgacatcaagacgagcggcttcagcatggagacgtgcagagtcatggttaacctc
atggacgagagcagcaacgggaagttgggtctgtcagagtttgccaccttgtggaaaaaa
gtgcagcgctacctgtccatctacaagaagaacgacacggacaactccggcacgatgagc
acacccgagatgagagtcgccttcaaagacgccggtttcaccctgaacaacgccatctac
cagctgttggttgcccgctacgctgagccagacttgacgctggactttgacaactttgtg
ggctgcctgatgaggctggagatcatgttccgaattttcaagaagtttgacccgaatgac
agcggatccatccagctcaacttcaatgagtggttaaacttctccatgatctga
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