Syngnathus scovelli (Gulf pipefish): 125968542
Help
Entry
125968542 CDS
T08785
Name
(RefSeq) RNA-binding protein 20 isoform X1
KO
K24052
RNA-binding protein 20
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125968542
Spliceosome [BR:
sscv03041
]
Complex A
Other components
Complex A specific factors
125968542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
Motif
Other DBs
NCBI-GeneID:
125968542
NCBI-ProteinID:
XP_049575674
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MRLAVKLYRVCGYGRVCEACFLRLTGGLFWVWTEILTLICYFLRAVPVDSADKKGPKVGS
QLSGSLQFGAQQQNQQLLLTPASLQLAQLQAQLTLQRLKLAHGGNTATAATVLNQVLSNV
AMAQPLFNQMRNPQVGFPTGVLGYPTSNPALGVGGFNQNLGNVRLNHHGGGPIVGQHGVE
FGIKSGPTYPSDIDRRLQYNVGATSTASAPATDGHYSVVNTQAKLNNVGFKQDFYGQDIS
SQQAGFNIADQNMNLYNRTGQTEQWDGSTNAKNTVNAPLVSDATNIWTAAGQAVRSRNQL
YNPEEPTSDHKFKGNSEGSSFVPDGLQVFGSYQPLHGSEETLCTGTRTLQPYQVNDYHAV
TPTQLPHQCSICDKKVYNLKDWEQHVKGKLHLQNRTLYNNEGSAVVSAGAAHYTLGRPAD
GALGGGDSMSSTAAGQDVSSGVNTSYLPVAAMTNYPLTSTGFTSHQQESKTFPPRKATTG
RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMRSTHQAFLEMAYIEAAQAMVQYYQLT
PAMINNQKLLIRMSKRYQELQLKKPGKDVQAIIQDIASHWERDEMQKLERYMPDRARSRS
PVRNSLSPQSHSPSFTSCSSAHSPQAAPCRGPERGTNGLGPHQGSWDWSSHYRRAEDDME
RDEPSRRNGCSIDSDRPNERPSDRRKVYGKPSDYVVSRSADDRGFDKGMTGNRDFPRGSP
QGKSFNSYRSMEENFYMKSDKVTRSSYQRHDSKSRRRNGSDHSRHSRHLESEVIDEPPRR
TPEDKKLRSPSRGRSRKPNKRCTPTEKHDSPTTNTDGQSKEHVSPQRSDKSKDVAECFNH
KDIEKNLGNEENTDDDCCYPKNMEEFLTVDEVGEDDDFIIEPDLPELEEDVTCPEESAEE
QAQTTKGTSLSPSLPLEDEEQEINKSIQEQTCEDAEVLETSTTEKEVPNETSLEEPIKSP
VTSEPPIVNLIELPNEEFKAALEETSTEDKVSDSGPLEEKPIKNHIQISDDCKVQDVVQV
TEASSNVTQHNDSILKKDIEAPSSSNEQEKVVIEHIIPLGVEFIEPRTGFFCKLCELFYT
SEETAKMNHCRSTVHYRNLQKYLSQLAHESLDLAEFSSTQ
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggctgtgaagctttatcgtgtgtgtggatatgggagggtgtgtgaagcatgt
ttcctcaggctcaccggaggacttttctgggtttggacggagattctaacactaatttgt
tatttcctccgtgcagtgccagtggacagtgcggacaagaagggccctaaggtgggaagc
cagctgtctggcagtttgcaatttggggcccagcagcagaaccagcaactcctcctgacc
ccagccagcctccagcttgctcagctccaggcccagcttaccctccaacgcctcaagctg
gctcacggaggcaatacagccaccgcggccactgttctcaatcaggttctttccaatgtt
gccatggcacagcccctcttcaatcaaatgcggaatccccaagttggcttcccaacaggg
gtgcttggttatccgacttcaaatccagccttgggggttggaggattcaaccagaatcta
gggaatgtgagactgaaccatcatggtgggggacccatcgtaggccaacatggtgtggag
tttggtataaaatccgggcccacgtatccctctgacatcgacaggcgtcttcaatacaac
gtgggagcgacgtcgacggcatcagcccctgctaccgatggacattattccgtggtcaac
actcaagcaaaactcaacaatgttgggttcaaacaagacttctatggacaggatatctcc
agccaacaagctggattcaacattgctgatcagaacatgaatctgtacaaccgcactgga
cagacagagcaatgggacgggtcaacaaacgctaagaacaccgtgaatgcgccgttggtc
tctgatgccaccaatatttggacagcagctgggcaggcagtgcgatccagaaatcaactg
tataacccagaggagcccacttctgaccacaaattcaagggcaatagcgagggctcgtct
tttgtccctgacggcttgcaggtctttgggagttaccaaccgctacatggaagcgaggaa
actttgtgtacgggtactaggacacttcagccgtaccaagttaacgactaccatgctgtc
acacccactcaactgccacatcagtgcagcatctgtgacaagaaagtctacaacctcaag
gactgggagcaacatgtaaagggaaaactacatctgcagaaccgaacgctgtacaataac
gaaggctcggcagtggtatcagccggagctgctcactacacgctcggtcggcccgctgat
ggtgctctcggtggaggagactcaatgagctccactgctgcaggtcaagatgtttcctca
ggagtcaacacctcatacttgccagttgcagctatgacgaattaccctttgaccagcacg
ggatttacgtcacaccagcaagagtcaaagacgtttcccccaagaaaggccaccacggga
cgtgttgttcacatctgcaacctccctgaaggcagttgtactgaaaatgatgtcatcaat
ctgggactgccttttggcaaagttaccaattacatcctgatgcgctcaactcatcaggcg
tttctggagatggcctacattgaggcagctcaagccatggttcagtactaccaactgact
ccagctatgataaacaatcagaaacttctgattcgaatgtctaaaaggtaccaggagcta
caactaaagaaaccgggtaaagatgttcaggcaatcatccaagatattgcttctcattgg
gaaagagatgaaatgcaaaaacttgagcgctacatgccagacagagctcgctcccgcagc
cccgtcagaaactccctcagccctcaatcacacagtcccagttttacatcatgtagctca
gcccacagcccccaggcggccccctgcaggggtccagagcgaggcaccaatggcctgggt
ccacaccaaggatcttgggattggtcttcacactatagacgagctgaggacgacatggag
agggatgaaccctccagacggaacggatgcagcattgacagcgaccgccccaacgaacga
ccatcggaccgccggaaagtctatgggaaaccctcggattatgtcgtctccaggtctgca
gacgatcgaggatttgataaagggatgaccggaaacagagacttccctagaggcagtcct
caaggcaagtccttcaactcctaccggagcatggaggaaaacttctacatgaagtcggat
aaggtgaccagatcttcataccaaagacacgatagcaagtcaaggaggaggaatggcagt
gaccacagcaggcattcgaggcatctggagagcgaggtgattgatgagccacctcgtaga
actccagaagataagaagctgcgttcacccagcagggggaggagtaggaagccaaacaag
aggtgcacccctactgagaaacatgacagccccacaacaaatactgatggccaatcaaaa
gaacacgtgtcacctcagcgcagcgacaagtcaaaagatgttgctgaatgttttaatcac
aaggacattgagaagaacttgggaaatgaagaaaacactgatgacgactgctgctatccc
aagaacatggaggaatttcttacagttgatgaagtgggagaagatgacgatttcattatt
gagccagaccttcctgagctggaagaagatgtgacctgtcctgaagagtccgcagaggaa
caagcgcaaacaacaaaggggacttcactgtcaccttcactccctttggaggatgaggag
caggagattaacaaatccatccaggaacagacatgtgaggatgctgaagtcctagaaaca
tctacaactgagaaagaagttccaaatgagacaagtttggaagaacctataaagagtcct
gttacttctgagccaccgattgtgaacctaattgaacttcccaatgaggagtttaaggca
gcactggaggagacgagtacagaagacaaagtttctgacagtgggcccttagaggaaaag
ccgataaaaaatcacattcaaatatcagatgactgcaaggtccaggatgtggtccaggtc
actgaggccagttccaatgtcactcaacacaatgacagcattcttaaaaaagatattgaa
gcgccctcatcatctaatgaacaggaaaaggttgtcattgaacacatcatccctttagga
gtggagttcattgagccgaggactggtttcttttgtaaactttgtgagctgttttacacc
agcgaggaaactgcaaagatgaatcactgccgcagcactgtacactacaggaacctacag
aaatacctgtcccagctggcacatgagagccttgaccttgctgaattctcaagcacacag
tga
DBGET
integrated database retrieval system
