Syngnathus scovelli (Gulf pipefish): 125968564
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Entry
125968564 CDS
T08785
Symbol
chrna9a
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-9-I
KO
K04810
nicotinic acetylcholine receptor alpha-9
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125968564 (chrna9a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125968564 (chrna9a)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125968564 (chrna9a)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
125968564
NCBI-ProteinID:
XP_049575727
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Position
5:6247169..6250658
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AA seq
540 aa
AA seq
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MKQAALIVWISLLVQVCQGAGGHYARKLLNDLMEDYSNALRPVGDTDKALNVSLQITLSQ
IKDMDERNQVLTTYLWIRQVWHDAYLKWNKEDYDDLEMINIPSDLVWKPDIVLYNKADEE
SSGPSNTNVKLRYNGEIVWDSPAITKSTCVVDVSYFPFDWQQCNLTFGSWTYNGNQVAVS
LGMDSGDLSDFVENVEWECHGMPAVRNVMMYGCCSDPYTEVTYTLLLKRRSSFYIFNLLL
PCFLISFLAPLGFYLPADSGEKVSLGVTVLLALTVFQLLVAESMPPAESMPYIGKYYIAT
MIMITASTSLTIFIMNIHFCGAEAKPVPHWAKVLIIDYMSKIFFVYEVGENCTTPECEKS
PLYPDETVSETSFDPDIHHLGSDSYKHNGHSIHYHHSQHCKKQDQVKENNKQHYKNHGHR
PEGQGEAAQHYHHHITNDEDYKAAPHASYLQHLNGGLKEQILYPEEKHLIPACPCSCPCL
QHNQVVKNIQYMANCFREQRTTCIKAAEWKKVAKVMDRFFMWIFFIMVFLMSILIIAKAS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggcggcactgattgtttggatcagccttctcgtgcaagtgtgtcagggggcc
gggggacattacgctcgcaaacttctgaatgacttgatggaggactactccaatgctttg
aggcctgtaggggacactgacaaagccctcaatgtctcccttcagatcacgctgtcccag
attaaagatatggatgagcgaaatcaggtgctaaccacatacctgtggatcaggcaagtg
tggcacgatgcctaccttaagtggaacaaggaggactacgacgacctggagatgatcaac
attccgagtgacctggtttggaagcctgacatcgtcctctataacaaagcagatgaggaa
tcgtcaggtccgtccaacaccaacgtgaagctgcgttacaacggggagatcgtctgggac
tcaccagccatcacaaagagcacgtgcgtggtggacgtttcctacttcccgtttgactgg
cagcagtgcaacctcacatttggctcatggacttacaatgggaaccaggttgctgttagc
ttagggatggacagcggcgacctgtctgactttgtggagaacgtggagtgggagtgtcac
ggcatgccggcggtgaggaacgtcatgatgtacggctgctgctcggatccatacactgaa
gtcacttacaccttgctcctgaagcgccgttcctccttctacatcttcaatctcctcctg
ccttgcttccttatctccttcctggcaccactgggtttctacctccctgctgactccggg
gagaaggtgtcgctgggggtcaccgtgctgctcgcgctcaccgtgttccagctgctggtg
gccgagagcatgccgccagcggaaagcatgccctatatagggaagtactacattgccacc
atgatcatgatcacagcttctacctctctcaccatcttcattatgaacatccatttctgt
ggagctgaggccaagccagtccctcactgggctaaagtcctcatcatagactacatgtcc
aaaatcttttttgtctatgaggtaggagagaattgtaccactcccgagtgtgagaagagc
cctctgtaccccgacgaaaccgtgagtgagacaagcttcgaccctgacatccaccacctt
ggcagcgactcgtacaaacacaatggccacagcatccattatcatcacagccaacattgc
aaaaaacaggaccaggtcaaagaaaacaacaaacagcattacaaaaaccacggccatcga
ccggaggggcagggagaggccgcacaacactaccaccatcacatcacaaatgatgaggac
tacaaggctgctcctcatgcttcatacctccagcatttgaacggaggactcaaggagcag
atcctctatccggaggagaaacatctgatcccagcctgcccgtgcagttgcccctgcctc
caacacaatcaggtggtgaagaacatccagtacatggccaactgcttccgtgagcagagg
actacttgcatcaaggctgcggagtggaagaaggttgccaaggtgatggatcgatttttc
atgtggatcttcttcatcatggtgttcctcatgagcatcctgattatcgccaaggcatcc
tga
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