Syngnathus scovelli (Gulf pipefish): 125968581
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Entry
125968581 CDS
T08785
Name
(RefSeq) circadian locomoter output cycles protein kaput isoform X1
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125968581
03036 Chromosome and associated proteins [BR:
sscv03036
]
125968581
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
125968581
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125968581
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
125968581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
Motif
Other DBs
NCBI-GeneID:
125968581
NCBI-ProteinID:
XP_049575746
LinkDB
All DBs
Position
5:complement(5299519..5314309)
Genome browser
AA seq
925 aa
AA seq
DB search
MFFASHRDDCSIFDGLMEEDEKDKAKRVSRNKSEKKRRDQFNVLIKELGTMLPGNTRKMD
KSTILQKSIDFLCKHKEIAAQSESSEIRQDWKPPFLSNEEFTQLMLEALDGFFIAIMTDG
NILYVSESVTSLLEHLPADLVDQNLLNFLPVGEHSDVYKALSTHPNDPESLTSDYLKSKN
YMEFCCHMLRGSIDPKEPPIYEYVSFIGNFKSLNNVPNVTRNGLAAVLQRSLQPAFDDQV
CFVATVRLTKPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSG
YDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFI
VCTHTVVSYAEVRAEQRRELGIEESKPEVTMDKSQDSGSELNTSSLKEALERFDRSRTPS
TSSRSSRKSSSHVSDNTCTSSKLHMDTATPPRQSLASTMEMTSQRRSSISSQSMSSQTTS
QSVTPGMITQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQPQQLQQQQQPQQLQQQQQPQQLQSNVQPVMEFSAQVNAMQHLKEQLEQRTRMIQANIQ
RQQEELRNIQEQLQRVQGQGIQMLLQQGGAMNMQLPQVAPVQQASTLSNQVQQTAINPVH
SGTPQLTIQQQAPPPQQSLQQQTQRQSQQPPQAQPQTQNSVPAQLYNTMMISQPGQHNVL
QISTSLPQNNTQQGTAVATFTQDRQIRFPAGQQLVTKLVTAPMACGAVMVPTSMFMGQVV
TAYNPFGGQQQGGQTQTLTLQPAQSSQGQTDASNQTAVVAQSGQQGQQQQQQQFLQGTRL
LHGNQSTQLILQAAFPLQQQGTFTQTTHQQQQPQQQQQQQQQSQQRQQQQQSHHQRHPQQ
LKPQPQKQQKAPSSHRTDSVSSQPQ
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcgcctcacacagggatgattgtagcatctttgatgggttgatggaagaagat
gaaaaggacaaagcaaaacgtgtgtcccgcaacaagtctgagaagaaacggagagaccag
ttcaatgtcctcatcaaggaacttggcaccatgttgcctggcaacaccaggaagatggac
aagtccacgatcctgcagaaaagtatcgacttcctgtgtaaacacaaagaaatcgctgcc
cagtcagagtccagtgagatcagacaggactggaagccgccatttcttagcaatgaggag
ttcacccagctcatgttggaggcactggatggcttcttcatagcaataatgactgatggg
aatatcctctatgtgtcagagagtgtcacttcattactggaacaccttcctgcggacctg
gtggaccagaatttgttaaacttcctgccagttggagagcattcagacgtgtacaaagcc
ttgtccacgcaccccaatgacccagagagccttacatcagattatttaaagagtaaaaac
tatatggaattttgttgtcatatgctccgagggtcaattgaccccaaagaacctcccatc
tacgaatatgtcagcttcattggaaatttcaagtcgctcaacaatgttccgaacgtgacg
aggaatggtctggcggccgtattacagcgctctctacagccagcctttgatgaccaagtg
tgcttcgtggctactgtacgcctcactaaaccccaattcatcaaggagatgtgtacagta
gaagagcccaatgaagaattcacctctaggcacagtttagagtggaagttcctctttcta
gaccacagagctccaccaattataggctacttaccatttgaggttctgggaacttcaggg
tacgactattatcatgtggatgacctggagacgcttgctaagtgccatgaacacttgatg
cagtacggtaaagggaagtcttgttactaccgtttcctgactaaaggtcaacagtggata
tggctgcagacgcactactacattacctatcaccagtggaactctcggcccgagtttatt
gtctgcacgcatacagtcgtcagctatgcagaagtgagggcggaacagcgaagggagctg
ggcattgaagaatccaaaccagaggtcactatggataagagccaggactctggttcagag
ctgaacacttccagcctcaaggaggcattagaaaggtttgaccgcagccgaacaccctca
acctcttctcgaagttcccgcaagtcctcatcgcatgtatcggacaacacttgcacttct
tccaagcttcatatggatacagccacgcctccgcgacagtccctagcttcaaccatggag
atgacgtcccagcgtcgctcatccattagcagccagtccatgagctctcagactactagc
cagagtgtcactccgggtatgatcacgcagcaacagcagcagcagcagcagcagcagcaa
caacaacagcagcagcagcaacaacaacaacagcagcagcagcaacaacagcagcagcaa
caacaacaacagcagcagcaacaacaacagcagcagcagcaacaacaacagcagcagcaa
caacaaccacagcaactgcaacaacaacaacaaccacagcaactgcaacaacaacaacaa
ccacagcaactgcagtcaaacgtacagccggtgatggagttctcagcacaggtgaatgct
atgcagcatcttaaggagcagctagagcaaaggaccagaatgatacaggccaacattcag
cggcagcaggaagagctaagaaacatccaggagcagctacagagggtccagggccagggt
attcagatgttgttgcagcagggtggagcgatgaacatgcagctcccccaggtggcgccg
gtccaacaggccagcactctgagcaatcaggtccaacaaacggcaatcaacccggtccat
tcgggaacaccacaactcaccatccagcaacaggcgcctcctcctcagcaaagccttcag
cagcagacccaacgacagtctcaacagccccctcaggctcagccacagacccaaaactct
gtgccagcccaactgtacaataccatgatgatctcccaaccggggcagcacaacgtgctg
cagatcagcaccagtctgccgcagaacaacacgcagcaaggcacagctgtggccaccttc
acgcaggaccgtcagatccgttttccagcagggcaacagctggtgaccaaacttgtaacg
gctccaatggcatgcggcgctgtcatggttcccacctccatgttcatgggccaggtggtc
accgcgtacaaccccttcggtgggcaacagcagggaggacaaacacagacactgactctc
caaccagcgcaatcttcccagggtcagactgacgcctccaaccagacggctgtggtggcg
caaagcggccaacaggggcagcaacagcagcagcagcagttcctacagggcactcgtctt
ctccatggtaaccaatccacacagctgattctacaggcagccttcccacttcagcagcag
ggtacctttacccagacaactcatcaacagcaacagccgcagcagcagcaacaacagcaa
caacaatcacaacaaaggcaacaacagcaacaatcccaccaccagaggcatccgcagcag
ctcaaaccccaaccccagaaacagcagaaagcgccgtcgtcgcacaggaccgacagtgtc
agcagccaaccgcagtaa
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