Syngnathus scovelli (Gulf pipefish): 125968583
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Entry
125968583 CDS
T08785
Symbol
vps37a
Name
(RefSeq) vacuolar protein sorting-associated protein 37A isoform X1
KO
K12185
ESCRT-I complex subunit VPS37
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125968583 (vps37a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125968583 (vps37a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125968583 (vps37a)
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
125968583 (vps37a)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125968583 (vps37a)
Exosomal proteins of colorectal cancer cells
125968583 (vps37a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
UEV
Motif
Other DBs
NCBI-GeneID:
125968583
NCBI-ProteinID:
XP_049575763
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All DBs
Position
5:8220402..8230256
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AA seq
408 aa
AA seq
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MLPSSVIEANCKLKPKADLTWIKGSGPHTQLNSLQQQRQRQIESLKAAHPSIAEIQKDVE
YRIPFTVNSSTITVNILLPPQFPQEKPVVSIYPPVGHHLIDSNNGTMITSPLVTNFGMHS
DLGKVIQSLLDEFWKSPPALMSTGPSGFPYSMFKPSSIPPYPTPGYHYGPRHVGQSQTPP
LAPAQSGVGPVLHPAVDGVHGSPRGPTPYGLITDLPMPVPIGDLQVGLNGHMYKMPEIPE
SFPELSDLNLTQLSDMSENEDLLLRFFMTLPQLKQVMSDKEELVTNIVDMAKKNLQIEPQ
LEGKRQEIINKFEQLTQLKFAFETKMQRQHDLSESCSLSTLQARLKVAAHQAEDDSETTA
ENFLEGRTDIDEFLTSFMEKRTLCHSRRAKEEKLQQSIHTHEQFPPTH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgctgccctcaagtgtcatagaagctaactgcaagctaaaaccaaaggccgacctgacg
tggataaagggttctggacctcacactcaactcaacagcctacagcagcaacgacagcga
cagattgagtctctgaaagctgctcatcccagcattgcagaaatccagaaagatgtggaa
tacaggatcccatttacagtcaacagctccactatcactgttaacattcttctgcctcct
cagttccctcaggagaagccagtggttagcatctaccctcctgttggtcaccacctcatc
gacagcaataatggcactatgatcacgagccctctcgtcactaattttggaatgcattca
gaccttggtaaggtcattcaaagtctgctggatgagttctggaagagtcctcctgccttg
atgtctactggcccgtctggttttccatatagtatgttcaagccatcgagcatccctcct
tatccgactccgggctaccactacggtcctcgacatgttgggcaaagtcagacaccacct
ctcgcaccagctcaatctggagtaggaccagtgcttcatcctgcagttgatggagtccat
gggtccccccgaggtccaaccccttatggcctcattactgacctgccaatgcctgtccct
attggagacttgcaggttggcctaaatggacatatgtacaagatgcctgagattccagag
tcttttcctgaactctctgacttgaatctgactcaactgtccgacatgtcagaaaatgag
gatttattactgagattcttcatgacactgcctcagctcaaacaagtcatgagtgacaaa
gaagagctggtcaccaacattgtggatatggcaaagaaaaaccttcaaatagagccacaa
ctggaagggaaaagacaagaaattatcaacaagtttgaacagttgactcaactgaagttt
gcctttgagacaaagatgcagcgacaacacgatctcagtgagagctgtagcctgagtact
cttcaggctcgattaaaggttgcagcacatcaagccgaggatgactctgaaaccacggct
gaaaactttttagagggacgcaccgacatcgatgaatttctaaccagcttcatggaaaag
agaacgctttgccacagcagaagggccaaagaggagaagttgcaacagtccatccacaca
catgaacagtttcctcccacccactag
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