Syngnathus scovelli (Gulf pipefish): 125968611
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Entry
125968611 CDS
T08785
Symbol
si:ch211-286b5.4
Name
(RefSeq) afadin- and alpha-actinin-binding protein isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04517
IgSF CAM signaling
sscv04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125968611 (si:ch211-286b5.4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125968611 (si:ch211-286b5.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125968611 (si:ch211-286b5.4)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
125968611 (si:ch211-286b5.4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
FKBP15
ATG16
CREPT
Motif
Other DBs
NCBI-GeneID:
125968611
NCBI-ProteinID:
XP_049575826
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Position
5:10795160..10802919
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AA seq
478 aa
AA seq
DB search
MLPSRSPVATVFSRDSYLVVACRLVEQKTPEWPHPPEDIAVLKCDAHMASSLAQTRAEKK
PQLPDSSRNTHSFPPWEYRHQTDSLREQLKEMDEHVARLQDMLKCERAKSTRLQLRVNQL
EAELRRREHQSNRMKERLAHLPDRNKDKGPSIEVLNFPPGGRGKNVKSIKSSQSTAKQEE
AALRLMLERREAELREAMKLRHSLTTLLHAIRVDMEQTLSNAEEDVSGSPNRNKRLTQAE
AVLGDHVTGGVVQSWKRVQQRLVDLQREGHMGDGTDHDKLLAQLEKELKESQQIVKLQQQ
MLQDSLESSIPSELSNSYFLEEWEHLQVHWADFNHQKRTFESERQSFTEAAIRLSRERQN
FENQKGSLLKQQYLHDSPLCSGREASNISDCNLLSLGPASKYGCVPISPSSIESSPVTVS
GFHQGRVSVLTPSTPELYAALSLSYNHRTKKGANQLERWDSKTDEIRANPAPPLDQSF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcttccttccagatctccagtggccactgtcttctcacgtgacagctaccttgtcgtt
gcctgcagattagtagaacagaaaacacctgagtggccgcacccaccagaggacattgca
gtcctcaagtgtgacgcccacatggcttcaagtcttgctcagacaagagctgaaaagaag
ccacagttaccagactcttctcggaacactcacagtttccccccatgggaataccgccat
caaacagattccctaagggagcaactaaaagagatggatgaacatgtggctagactccag
gacatgctgaagtgtgaacgggccaaaagtacccgtttgcagctaagggtcaaccagctt
gaagctgagctgagacgcagggagcaccaaagcaacagaatgaaagaacgacttgctcat
ttgcctgacagaaacaaggacaaaggaccttccattgaggtgctgaactttccaccggga
ggtcgaggcaaaaatgtgaagtcaataaagtcgtcccagtccactgcaaagcaagaagag
gcagcgctgcgcctgatgctggagcgcagagaagcggagctccgagaagcaatgaagctg
cgacacagccttaccaccttactacatgctatcagagttgacatggagcaaaccttgtca
aacgctgaggaggacgtgagtggatccccaaacaggaacaaaaggttaactcaagctgag
gcagtgcttggtgaccatgtgacaggaggtgtagttcagagttggaaacgtgtgcagcaa
aggctggttgaccttcaacgtgagggccacatgggagatggaactgaccatgacaaactc
ttggctcagcttgaaaaagaactgaaagagagtcaacaaattgtaaaactacaacagcaa
atgctgcaggacagtcttgaatcatccatcccatctgagctgagtaattcttactttttg
gaagaatgggagcatctccaagtgcactgggcagacttcaaccatcaaaagcggactttt
gaaagcgagagacagtccttcacggaggctgccatacgcctaagtcgtgagcgtcagaac
tttgagaatcagaagggctctctcttgaagcagcagtatttacatgattctcctttgtgt
agtggaagagaagcaagcaacataagtgactgcaaccttcttagtttggggcctgctagc
aaatatggctgtgttcccatttccccatcttccatcgaatccagccctgttacggtttca
ggattccatcagggaagagtcagtgttttaacacccagtactccagagctctatgccgcc
ctcagtttgtcatacaaccacagaaccaaaaagggagcaaatcagttggagagatgggat
agtaagacagacgagatacgtgcaaacccagctccacctttggatcagtcattttga
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