Syngnathus scovelli (Gulf pipefish): 125968613
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Entry
125968613 CDS
T08785
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125968613
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125968613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
LIG3_BRCT
IBB
AAA_22
SWI2_SNF2
Selenoprotein_S
Motif
Other DBs
NCBI-GeneID:
125968613
NCBI-ProteinID:
XP_049575842
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MTELLLQIKNSVPAKKKTTLNQSDLQRWGLKGIQLRTYQLHGVQWLTQCLNNQQGCILGD
EMGLGKTCQTISLLVYMSCALDVKGPFLILSPLSVMENWRSELERFAPSLTVLCYKGDKE
RRIEIQGDAQDFHVLLTTYELCLKDASFLRRWKWKVLVVDEAHRLKNQNSLLRKTLTEFS
VGFRVLLTGTPIQNNLQELYSLLSFIQPAIFSEDDVDDFARSYADVRNRPALAAELQSVL
EPFLLRRVKSEVAVDLPKKTEVVVYHGMSALQKKYYKALLMKDVEAFGSDQSNKTRLLNI
LIQLRKCVDHPYLFDGVEPEPFEMGEHLVEASGKLCLLDSMLAYLQQGGHRVLLFSQMTR
MLDIIQDYLEYRGFSYERLDGSVRGEERNLAVKNFSSKDVFVFLLSTKAGGVGLNLTAAD
TVIFMDSDFNPQNDLQAAARCHRIGQSRPVKVIRLLARDTVEEIMYSRAVSKLELTNTVI
EEGRFSLLERAQSAAAGLHLSEILKFGVDKLLSSDESSVQDVKLEKILGASRDGRWTSDQ
DDVGEAPSPLRDDEDSDSESDRQNHMYYFEGKDYSKDPSSEDQRSFERLLEQQLAELPNA
GGEGRSLRNKTDVSSATGLIFPTRKRRPLTEAELELRRQKRQEAAAKRAKYEAEAKKKQE
EHKYKKKMAWWASQGYTSRCLKSPDSEEDEEEEDGSSVSSVDSDSGAISYVLGDVTHPHT
ARGDAIIVHCVDDSGWWGKGGLFTALEVRSDEPRRQYELAGEMKDLDVGNVLFFPIDDKQ
SRLDGSDHLALIVAQQRDKANKLSGIFLTALDQGLKKIHAAAKRHKASVHLPRIGHATKG
FNWYGTERLIRKHLASRGIPTFIYYHNRGGKNKSTATTSSAQASSSAAADAQETGPSSPR
TSSELPCFMKGVRVFFYNLTATDRKRLARYLRTYDGDEDEVMSGEVTHIVAEVEHEVHAQ
ELRELTRRYDRAVLVGKAWLEACFSQQKQVGSADFVLALT
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgacggaattattgctgcagattaaaaacagcgtgcccgccaaaaagaagacgactttg
aatcagagcgacttgcagcgttggggtttaaaagggatccagttgaggacctaccagctg
catggcgtccagtggctgactcagtgcctgaacaaccagcaaggatgcatcctgggggat
gagatgggcttggggaaaacttgtcagaccatcagcctgttggtgtacatgtcatgcgct
cttgatgtcaaaggtccatttttaattcttagcccgctctccgtcatggagaattggagg
agtgagttggaacgctttgcaccatctttgactgtgctatgctacaagggagacaaagag
agacggattgagattcaaggggacgcgcaagacttccatgttctgctcactacatacgag
ctctgcctcaaagatgcttccttcctgagacgctggaagtggaaggttctggtcgtagac
gaggctcaccggctcaagaaccagaactctctactccggaagaccctgacagagttctca
gtgggtttccgggttcttctgaccggcacgcctatccagaacaacctgcaggagctctac
tccctgctgagtttcatccagcccgccatcttctcagaggacgatgtcgacgactttgcc
cgctcttacgccgatgtgcggaatcgacctgcgctcgccgctgagctccagagcgtcctg
gagcccttcttgctccgccgggtcaagtcggaggtggcggtggacctgcccaagaagacg
gaagtggtggtctaccacggcatgtctgcgctgcagaagaaatactacaaagccctcctg
atgaaagatgtcgaggcttttggtagcgaccaaagcaacaagacccgtttgctgaacatc
ctgattcagttgaggaagtgtgtggaccatccgtatctgtttgatggagtggagcctgag
ccgtttgagatgggggaacatctggtggaagccagcggcaaactctgccttcttgacagc
atgctggcctacctgcagcaaggcggccatcgagttctactcttctcccagatgaccagg
atgctggacattattcaggactacttggagtacagaggtttcagctacgaacgcctggac
ggctcggtccgcggcgaagaacgcaatcttgctgtgaagaacttcagcagcaaagatgtt
tttgtcttcctgcttagcaccaaagcaggaggcgtcgggctgaacctcacggccgccgac
acggtcattttcatggacagcgacttcaaccctcaaaacgacctgcaggcagccgcacgc
tgtcaccggattggccagagcaggccggtgaaggtgatccgcctgctagccagagacacg
gttgaggagatcatgtactcccgcgccgtctccaagctggagctcaccaacacggtgatc
gaagagggccgcttctcgttactggaacgcgcccagtcggcggcggccggactgcatctc
agtgagattttgaagttcggcgtggacaagttgctgtcttcggacgagagttcggtccag
gacgtgaaactggagaagatcctcggcgcctcacgcgacggccgctggacatctgatcaa
gatgacgtcggcgaagcgccttcccccttgcgagacgatgaagacagcgactcggaatct
gacaggcagaaccacatgtactactttgagggaaaggactacagcaaggaccccagctcg
gaagaccagagaagtttcgagcgcctgctggagcaacagctcgccgagttgccgaatgct
ggcggggaaggacgaagtctacgaaacaaaaccgacgtgtcatcagcgacggggctcatc
ttcccgaccaggaagcggcgtcctctcacggaggcggagctggaactgcgtcgacagaag
cgccaggaggcggccgccaagcgggccaaatatgaggcagaggccaagaagaagcaggag
gagcacaagtacaagaaaaagatggcgtggtgggcgtcccaaggctacacatcccgctgc
ctgaaatctccggacagcgaggaagacgaggaggaagaggacggcagcagcgtgagctcg
gtcgactcggatagcggcgccatcagctacgtcctgggagacgtcacgcatcctcacacg
gcacgtggggacgccattatcgtccactgtgtggatgactcgggctggtgggggaaggga
ggcttgttcaccgcgctggaggtgcggtcagatgaaccacggcggcagtacgaactggca
ggagagatgaaagacttggatgtcggaaacgtgctgtttttccccatcgatgacaaacag
tcccgattggacgggagcgatcacctggccctcatcgtcgcgcaacagcgagacaaagcc
aacaagttgtccggaatctttctgacggcactcgaccaaggcctgaaaaagattcacgcc
gccgctaaacggcacaaagcgagcgtgcacctgcctcgcatcggccacgccaccaagggc
ttcaactggtacggcaccgagcgtctgatcagaaaacatctggcttccagaggcatcccc
actttcatatattatcacaatcgcggtggcaaaaacaaatccaccgccaccacctcttcg
gcgcaggcgagcagctcggccgccgcggatgcacaggagacaggcccatcgtccccacgg
acttcctcggagctgccatgtttcatgaagggcgtccgtgtgtttttctacaacctgacg
gcaacggacaggaagaggctggcccgctacctccgcacttatgacggcgatgaagatgag
gtgatgagcggcgaagtcacgcacatagtcgccgaagtggagcacgaggtccacgctcag
gagctgcgggaattgacccgccgctacgatcgggccgtgctggttggcaaggcctggctg
gaagcttgcttttcccaacagaaacaagtcggcagcgcagatttcgtactcgcgcttaca
taa
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