Syngnathus scovelli (Gulf pipefish): 125968737
Help
Entry
125968737 CDS
T08785
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125968737
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Other domain-containing proteins
FERM domain-containing proteins
125968737
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_C_FAK1
FERM_f0
PDZ_2
tify
Motif
Other DBs
NCBI-GeneID:
125968737
NCBI-ProteinID:
XP_049576055
LinkDB
All DBs
Position
5:complement(12511302..12537580)
Genome browser
AA seq
2052 aa
AA seq
DB search
MEVQDRSRSPSRKTSRVEQVVGRLLRRSRELGSRSHSLGRDRVAIDGRPAESSGTEERNY
PFRLNVLIQRDPKLKSHGLTLSSLTPIVVQEVTQGGPADGRLVPGDQLVKINNVVVDDLT
PEQAAEIIRECQESLSLTILRTMLGPKSSFITPEKRAKLKSNPVKVRFAEEVEFNGHAQG
NSLLFLPNVLKVYLENGQTKAFKFEPSTTVKDIVMTLKEKLSLRNIEHFSLMLEQLYSVT
KLLLLHDEEKIQQVVQKKESRDYRCLFRVCFIPKLPETLLQDDPTAFEYLYLQGVNDVLQ
ERFAVEMRCNTALRLAALQIQERLASYGLSPKTSLKIVTKTWGIDNFVSSTLLRNMREKD
LMKAISFQLKKSQSQHESKQKGLTVNQARINYLEELSDLKSYGGKTFSATMMLQDRESTV
TLLVGARYGVSQVINHKLSILSNLTEFNNITRLELVPESEKVGLVKIYLQDIMPITLLLE
TAAAKDMSCLIAGYCRVFVDPNVNIFPWMDVPKKHRVSAEEGYVSRCGSDSDHSSDLDME
RPVTHPSFNAKRRPRVRSSSEPEARKRHVRRNKHDNECRNTKSSDKREKDKNDADTKTEN
HLSAYENECNILLREKAAQNVGQPEMDYMKLENEPQESRLGSGIAEDQPSQSDSCHTDSR
IVTSPSSDSLDLLEEDDLISCSSSSLHPIVSTQNHAQIYSPLEIHPYARPHSEANSLVPP
PAHSHPLLHLTSYNSDEGDNRRPDDLVDPQHLEAAPISHDTHLTNQSTSSYTEEDSICFA
ELSRLVDFLPSPPEASDDEEAEEKSLRKRKNMLIDSKICEGYVSKQTGRKSSIKGHPQSP
SLSSASSHSDFVFNFDQRDASCYYKLCSNITPDSARSLSQPVNDTPKGEREKMVEEQRQV
NEHESAPILQPPPGFGDSSSDEEFFDARDGFTSPDDPTSGMELKDNSTELKLDSVSTLNL
SDISVSMADTKTDEKSEEEQKQDKKGSGKKTLYDLRKRHRKRRSFMETDYTSRVSYPEPR
PTSMHDQAHSTLSSNFVTESSNAHRLSSEPQPLEQTDNPSSTVLYSMTYSEGEPAQLESK
PIPSYSGTNEQTSDLLKSDTRNRKQEMEMEPDAMESKSVTDHIKIVAPSITVVRCRLDPE
AKESLDCRVERPETAKDQEEEGEKKTEEEEQSVTGNDPSTSDKLLSKVTENQDNSNGPMN
CSEREVKTFIMTSWLTELNDKSVHPIAHVQNSHAEDDMPKDDATLLSFCPPPPPPSSPLP
SMPLCHNSQSGYLPKEFPESPTKTSSSNSEEKQKVNSSQLHLEITPSGDEPTDMITVAMT
AYNEVTDSMNSDVFDDNNLSTAYIGNNVDKHDWTTAITCTMGIDSPTGKDQSEISIQCRN
NSTTSTHIKSNEYTHTINSITAKLGVATSVINPSINSGTGLKTDISSALCMAETNREEYT
SPSVDSSSLQANTAVAHDPAKEPLLPTHFIFQSCSPSIMGRLSASTLRGKIQKLPLYLSR
SQETLNQVGLENEAQSPIRDGEGNIHISHVVNNIHDVNEFKETTTEEMESDDSDTTVTGS
EVECEFFVETAAANNSTVVSELKETPAKDLIDHEAASLPVQVEPEPQHKHIFLPEINENT
LDPITEPPVSTLSSLRRDFNVDTPGPIIVPPESKMRDTKPDESIPGQQVSTRSTHSPPPI
VVTTQNLNGPCLHFHSQSQIAQRTSSDRPLMGLCRSAEQTTDSSHPLSSGCKVFTFWEEP
SHVGEEGTTPNLKPEIGCTSVLTSRCESVVEGLNMDACGCPAVYTNCFSREGSFDEDLTV
YEFSCQGSGETQNSRLPLPLITDPPTSSLLTSSSINPPYYPHILQSSATSELSPLLSPLS
DAEYLHTQTQKDTINRLRKQHYPEAPTGFQVLRADVDQLLSVLENISADRSVVGRGGFHP
RETCASHFTKNKQVLQTEARRLTTYCQEVVVIGQSPEKMLNALADSFRTLVELAGACIWF
SSCDRCKQRNAEAVAGLQDVARSFRDFCLAAERAGRKHSCHDLSTKLLAKQCTALTASVF
CLTQIFRTLTAL
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgcaggacaggagtcgctccccttcccgcaagaccagcagggtggagcaggtg
gtgggcagattgctgagacgttcacgggagttgggcagcaggtctcattcgttgggcaga
gacagagttgcaatagatgggaggccagcagaatcctctggcacagaggagcggaactat
ccctttcgcttgaatgttttgatccagcgggacccaaagctcaaatctcatggcctcaca
ctttcttccctgacacctatcgtggttcaagaagtcacccaaggtggtcctgcagatggc
cgtcttgtccctggcgaccagcttgtgaagatcaataatgttgttgtcgatgacttgaca
ccagagcaagcagctgaaataatcagagagtgtcaagagtcattgtctctgactatactc
agaacaatgttgggccctaagtcatcatttatcacgcctgagaagagggccaagctcaag
tccaatcctgtaaaagttcgctttgctgaggaggtggagttcaatggacacgctcagggc
aactcactgctattcctgcctaatgttctgaaggtatatctggagaatgggcaaaccaag
gcttttaaattcgagcccagcacaacagtcaaggacattgtgatgacgcttaaggaaaaa
ctttctctgagaaatattgaacatttctccctgatgctcgagcagctatacagtgtcact
aaactccttctgctacatgatgaagagaaaatacagcaggtggtccagaagaaggagtcc
cgtgactacagatgtctattccgtgtttgtttcattccaaaactacctgagactttgcta
caagatgatccgactgcctttgagtatctttacttgcagggagtgaatgatgtcctgcaa
gagcgtttcgcagtggaaatgaggtgtaacacggctctacgacttgccgcactgcaaatc
caggagagattggcgagctatggactgtcccctaagaccagcctgaagatagtcactaaa
acgtggggtattgacaactttgtttcatctacattgctgagaaacatgcgagagaaagat
ttgatgaaggccattagcttccagctgaagaagagccaatcacaacatgaatccaaacaa
aagggcctgacagtcaatcaagcgcgcatcaattatctggaagaactgagtgatctcaag
tcttatggcgggaaaacctttagtgcaactatgatgctccaggacagagagtccacagtt
acactgttggtgggcgcccgttatggagtgagtcaggtgatcaaccacaaactgagcatc
ctttccaacctcacagagtttaacaacatcacacgcctcgagcttgttcccgagtctgaa
aaggtcggcttggttaaaatatacctgcaggacattatgccgatcacactactactggag
acagctgcagcgaaagatatgtcatgcctaatagcaggatactgtcgagtatttgttgac
cccaatgttaacatctttccctggatggacgtcccaaaaaaacacagagtgtctgctgaa
gagggttatgtttcacgttgtggtagcgactcagaccattcgtccgacttagacatggag
cggcctgtcacccatccgtctttcaatgccaaacgccgcccacgtgtcagatcctcttca
gagccagaggcaaggaaaaggcacgtcaggagaaacaagcatgacaatgaatgtagaaat
accaaatcgtcagacaaaagggaaaaagacaagaatgatgctgatacaaaaacagaaaat
catctatctgcgtatgagaatgagtgtaacatactgctcagggagaaagcagcccaaaat
gttggacaaccagaaatggattatatgaaacttgaaaatgagccacaggaatctaggttg
ggaagtggaatagcagaggaccaaccatcacaatcagattcatgtcatactgactctcgt
attgttaccagcccttccagtgattctctcgacctcctggaggaagacgacttgatttca
tgttcctcttcctcattgcatccaattgtgtcaacacaaaatcatgctcaaatctattca
ccccttgaaattcatccctatgctcgcccacactctgaagccaactcactggttcctcca
cctgctcattcccatcctcttcttcacttgacatcctacaatagtgatgaaggggacaac
agaaggcctgatgacctagttgatccccaacatttggaagctgcccccatctcacatgac
acacaccttaccaatcagtccaccagttcttacactgaagaggacagcatatgtttcgct
gagctctctcgccttgtggacttcctgccgagccctccggaagccagtgacgatgaagag
gctgaagagaagagcttgaggaaaaggaaaaatatgctgattgacagcaaaatttgtgaa
ggttatgtttccaaacaaacaggcaggaagagcagtattaagggacacccacagtccccg
tccttgtcctcggcctcttcccactcagattttgtgtttaactttgaccagagagatgcc
agctgctactacaaactctgctccaacatcacccctgacagtgctcgtagcctttcccag
cctgtgaatgatactccgaaaggagaaagagagaagatggtggaagagcagcgtcaagtt
aacgaacatgagtcagctccaatcctacagccaccacccggctttggagacagcagctcc
gatgaggagttctttgatgccagagatggcttcacgtcacctgatgacccaacgtcaggc
atggagctaaaagataatagcactgagttgaagttggattctgtaagcacactcaacctg
agtgacatcagtgtctctatggcagatacaaagaccgatgaaaaatcagaggaggagcaa
aaacaagacaagaaaggaagtggcaagaaaacattgtatgacctgagaaaaagacaccga
aagcgtcgttccttcatggaaactgattatacctccagggtgtcgtatccagaaccccgc
ccaacatcgatgcacgaccaggcccattccactctcagtagcaactttgtgaccgaaagt
agcaatgcccacagactgagttctgagcctcaacctttagaacaaactgataatccaagt
tctactgtactgtactccatgacttactctgaaggggaaccagcacagcttgagtcaaaa
cccattccctcttatagtggaaccaatgaacaaacaagcgaccttctgaagtcagacacc
aggaacaggaaacaagaaatggagatggaacctgatgcgatggaatcaaaatctgtcaca
gatcacattaagatagttgccccttccatcactgttgtgcgatgtcggttggatccagaa
gcgaaggaaagtcttgactgtagagttgagagaccagagactgcaaaagatcaggaggag
gagggagagaaaaaaacagaggaagaagaacaaagtgtgacagggaatgacccatccact
tcagataagctcttgtcgaaggttactgagaaccaagacaattcaaatggtccaatgaac
tgcagtgaacgtgaggtcaaaactttcattatgacttcatggctgacagagttgaatgac
aagagtgttcacccgattgcccatgttcaaaattcacatgcagaggatgatatgcctaaa
gatgatgcaacacttttatcattttgccccccaccacctccaccctcatcccctctgccc
tcaatgccactttgtcacaattcccaaagtggttacttacctaaagaattcccagaaagc
ccgaccaaaacatcttcatccaactctgaggagaaacaaaaagtcaacagctcacagtta
catttagaaattacaccaagtggagatgaacctactgatatgattacagtggctatgact
gcttacaatgaagtcactgacagcatgaattctgatgtttttgatgataataacttgtca
actgcttatattggcaacaatgttgacaaacatgattggacaacagctataacttgcacc
atgggtatcgattcacctacaggcaaggatcaatctgagattagtattcaatgtcgcaac
aattcaaccacttccacccatataaaaagtaacgaatacactcacactataaactccatc
acagctaaacttggagttgcaacaagtgtcatcaatccttcaattaattcagggactgga
ttaaaaactgatatttcaagtgctttatgcatggctgaaactaatagagaagaatacact
tctccaagtgttgattctagctcacttcaagctaacactgccgtggcccatgatccagcc
aaagagcctcttctgccaactcacttcatcttccaatcctgttcccccagtattatgggc
cgtttgtctgcctccacccttcgagggaagattcaaaagttacctctttatttgtcacgt
tcccaagagaccctcaaccaagttgggttggaaaatgaagcccaaagtcctattagggac
ggtgagggcaacattcatatttcacatgttgtaaataacattcatgatgtcaatgaattt
aaagagacaacaacggaggaaatggagtcagatgattcagatacaactgttacaggatca
gaggttgagtgtgagttctttgttgaaacagccgcagccaataactcgactgtagtatca
gaactaaaggaaacaccagccaaggacttaatagatcatgaagcagcatccttacctgtc
caggttgaacctgaaccacaacataaacatatatttctccctgaaataaacgagaatact
ctggatccaataacagagcctccagtttccacgttgagtagcctccgaagagattttaat
gtggacactcctggtcctataattgtacctccagaatcaaagatgagagatacaaagccc
gatgaaagcataccaggacaacaagtgagcactcgctcaacccacagccctcctccgatt
gtggtgacaacacaaaatctaaatgggccgtgtctgcattttcatagtcagtcgcaaatt
gcgcaaaggaccagcagtgacaggcccttgatgggtctttgtaggtcagcagaacagaca
acagactcatcgcacccactttcttcaggctgcaaggtgtttaccttctgggaggaacca
tcccacgtaggggaggaagggactactccaaacttgaaacctgagattgggtgcacatct
gtgctgacgtccaggtgtgagtcagtagttgaaggattaaatatggatgcttgtggttgc
ccagcagtctacaccaactgcttcagcagagagggcagctttgatgaggacttgaccgtc
tatgagttctcttgccaaggcagtggcgaaacgcaaaattcaagattacctcttccactc
ataaccgatcctccaacatcatctcttcttacatcttcctccataaaccctccctactat
ccacacattttacagtcctcagcaacgtctgagctcagtcccctcctctcacctctatct
gatgcagagtatcttcatactcaaacccaaaaagacaccattaatcgccttagaaagcaa
cattacccagaagcacccactggcttccaagttctacgtgcggatgtagatcagctcctg
tctgtcctggagaatatcagtgctgatcgatctgtagttggtcgaggaggttttcaccct
agggaaacgtgcgcttcccactttacaaagaacaagcaagtgctccaaactgaggcaagg
cggttgacaacatactgccaagaagtggttgtcattggccagagtccagagaaaatgctc
aacgctctggctgatagtttccggaccctggtggagttggctggcgcatgcatatggttt
tctagttgtgacaggtgtaaacaaaggaatgcagaagcagttgctggtctgcaagacgtg
gcccgctcattcagggacttttgtctggcagcagagcgagccggcagaaagcatagctgc
catgacctgagcaccaagctgctagccaaacagtgcactgcactcactgcatctgtcttc
tgcctcactcaaatcttccgtactctcactgcactgtga
DBGET
integrated database retrieval system
