Syngnathus scovelli (Gulf pipefish): 125968739
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Entry
125968739 CDS
T08785
Symbol
rptor
Name
(RefSeq) regulatory-associated protein of mTOR isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04136
Autophagy - other
sscv04140
Autophagy - animal
sscv04150
mTOR signaling pathway
sscv04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
125968739 (rptor)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125968739 (rptor)
04136 Autophagy - other
125968739 (rptor)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
125968739 (rptor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125968739 (rptor)
Membrane trafficking [BR:
sscv04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
125968739 (rptor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
Beta-prop_EML_2
HEAT
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
HEAT_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Cnd1
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
EIF3I
WD40_2
PDS5
Motif
Other DBs
NCBI-GeneID:
125968739
NCBI-ProteinID:
XP_049576057
LinkDB
All DBs
Position
5:complement(12105167..12206592)
Genome browser
AA seq
1357 aa
AA seq
DB search
MKMDADLLHLPAVGFAEEEADMNDWELPLAFMKKRHSEKIEGSKALAQSWRMKDRMKTVS
VALVLCLNVGVDPPDVVKTSPCARLECWIDPLSMSPQKALETIGANLQKQYENWQPRARY
KQSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEIWVFNKNYTQYIPLSI
YDLQTWMGSPSIFVYDCSNAGIIVTSFKQFALQREQELEVAAINPSHPLAQMPLPPSMKN
CIQLAACEASELLPMNPDLPADLFTSCLTTPIKIALRWFCMQKSAKLVPGVTLDLIEKIP
GRLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRS
YNCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVW
LTMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGCFLDLGPWAVSLALSVGIFPYVLKL
LQSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADSYMPAEHRTMAVFIL
AVIVNSYSTGQEACLQGNLIANCLEQLSDPHPLLRQWVAICLGRIWQNFDPARWCGVRDS
AHEKLYILLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLINDGSPVV
RKELVVALSHLVVQYESNFCTVALQFIEEEKNYTVPSPANTSEPGNLTPVRDSPAIPRLR
SVNSYTNIRAVTTARNLNKSLQNLNLNEEGGPAAFSPGNLSTSSSASSTLGSPDNDEYIL
SFETIDKMRRVSSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPFPEVSDLAMKVLNCIAY
KAMMNARPQRILDSGSLTQSAPASPTSKGTHIHQAGGSPPMPSTSSSSLTNEVPKPPTRD
QPAARPPYTPTLGGQAPHSHQFPRTRKMFDKGPEQAAEDGDEPCGHRNYISAALQTGLCD
WSAKYFAQPVTKIPEEHDLQSQVRMERQWRFLRNARVKRQSRSITQRGVSRLDDQIFINR
NPGVPSVVKFHPFNTCIAVADKDSICFWDWEKGERLDYFYNGNPRYTRITAMEYLNGHDC
SLLLTATDDGALRVWKNFADQKNPEMVTAWQGLSDMLPTTRGQPSTSAHSLARRVSIYLD
RSKQGGAGMVVDWEQETGLLMTSGDVRVIRIWDTDREMKVQDIPTGADSCVTSLSCDSQR
SLIVAGLGDGSVRVFDRRMGPNECRIMTYREHGAWVVKAHLQKESDGHIISVSVNGDVRF
FEPRTPDSVNVLQTVKGLTALDIHPQANLFACGSMNQFIAVYNANGDVISNIKYYDGFMG
QRIGAISCLAFHPHWPHLAVGSNDYYMSIYSAEKRLR
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggatgcagacttgctacatttgccagctgtgggctttgccgaggaggaggcc
gacatgaatgactgggagctgcccctggccttcatgaagaaacggcactcggagaagatt
gagggatctaaggcccttgcacaaagctggaggatgaaggacaggatgaagactgtaagt
gtagcgctggtgttgtgtctcaatgtgggagtggaccccccagatgtcgtcaagacatcc
ccctgcgccagattggagtgctggatagatcctctgtcgatgagtccacagaaagccctg
gaaaccattggggccaacttgcagaagcaatatgaaaattggcaaccaagggcacgttac
aaacaaagcctggaccccacagtggatgaggtgaaaaagctatgcacgtctctcaggcga
aatgccaaagaggagcgggtcctctttcactacaatgggcatggggttccacggcccact
gtcaatggagaaatttgggtttttaataagaactacacccagtacatcccgctgtccatc
tatgaccttcagacctggatggggagcccctccatttttgtttatgactgctccaatgct
ggaatcattgtcacgtccttcaaacagttcgccctgcagcgagaacaggagctggaggtg
gctgccatcaatcctagccatccacttgctcagatgccgctgccaccttccatgaagaac
tgtatccagctggctgcctgtgaggctagcgagttgctaccaatgaaccctgacctcccc
gctgaccttttcacctcctgcctcaccacacctataaagattgccttgcggtggttttgc
atgcagaagagtgctaagttggtgcctggggtgacgttagaccttattgagaagatccct
ggcagactcaacgacaggcgcactcccctcggagaactcaactggattttcacagccatc
actgataccattgcctggaacgtgttgccccgagatttgttccagaagctgtttcgtcag
gatcttctggtggccagcttgttccgcaattttctattagcagagaggataatgaggtca
tacaactgtacacctgtcagcagccctcgcttgcctccaacatacatgcatgccatgtgg
caagcgtgggacctggctgtggatatctgcttgtctcagctgccaaccatcattgaggag
ggcaccgcattcaggcacagccctttcttcgcagaacagctgacagcttttcaggtgtgg
ttgacaatgggcgtagagaaccggaatcctcctgagcaactcccaattgtcctgcaggtc
cttctcagccaagtgcatcgacttcgggccctagaccttcttgggtgttttctggacctt
ggaccctgggctgttagtctggccctgtctgttggaatcttcccatatgtgttgaagctg
ctacaaagctcagccagagagctgcggccacttctggttttcatctgggctaaaatcctc
gccgtggacagttcctgtcaagctgacctggtcaaagacaacggtcacaagtacttcctt
tctgtgttggctgacagctacatgccagctgaacatcggaccatggctgtcttcatattg
gctgttattgtgaacagctatagcacaggacaggaggcctgtctgcagggtaacctaatc
gcaaattgcctggagcaactttcagacccccacccactgcttcgccaatgggtagccata
tgcctgggtcgcatctggcagaactttgacccggcccgctggtgtggagttcgtgatagt
gcacacgagaagctctacatcttgttgtctgatccaatccctgaggtgaggtgtgctgct
gtctttgctctcggtacatttgtgggaaactccgctgagaggacggaccactccaccacc
attgaccacaatgtggccatgatgcttgcccagctcatcaacgatggcagccctgtagtc
cgcaaggagttggtggtagcattgagtcacctggtagttcaatatgaaagcaacttttgt
accgttgctcttcagttcatagaggaggagaaaaattatactgtgccgtcgccagccaac
acttcagagcctggtaacttaactcctgtgagggacagtccagccatcccacgtctccga
tctgtcaactcctacactaacattcgtgcagtcaccactgcccgtaacctgaacaaaagc
ctacagaacctgaacctcaatgaagaaggtggaccggcagctttttcaccgggaaacctg
agcacaagtagtagcgccagcagcaccctgggaagccccgacaatgacgagtacattctc
tccttcgagaccatcgacaaaatgcgacgggtgtcttcttattcttcactcaattccctc
ataggtgtgtccttcaacagtgtttacactcaaatctggagagtgcttctacaccttgct
gcagacccttttcctgaagtatctgacttggcaatgaaggtcctcaactgcatcgcatac
aaggcaatgatgaatgctcgccctcaaagaattctggattctgggtctcttacccagtca
gctccagccagccccaccagcaaaggtacccatattcatcaagcaggtggctcccctcct
atgcccagcaccagcagctcaagtctgactaacgaggtacccaaacccccaaccagagat
caacctgccgcacggcctccttacacacctacacttggaggacaggcgccccattcacac
cagtttccccgcactcgtaaaatgtttgacaagggacctgagcaggccgctgaggatgga
gacgagccttgtggtcacagaaactacatcagcgccgccttacaaacgggtctatgtgat
tggagtgccaagtactttgctcagccagtgacaaagatcccagaagagcacgacttgcag
agtcaggtgaggatggagcggcagtggagatttctaagaaatgctcgtgtcaaacggcaa
agcagaagcatcacacaaagaggtgtttctcgactggacgatcaaatattcattaatcgc
aatcctggcgttccctctgtcgtcaagttccaccccttcaacacctgtatagcagtagcc
gacaaggacagcatctgtttttgggactgggagaagggcgagagattggactacttctac
aatggcaaccctcgctacactcgcatcacagctatggagtatctgaatgggcacgattgc
tcattgctgctcactgcaacagatgatggagccttgcgcgtttggaagaactttgctgac
cagaagaacccggagatggtgactgcctggcagggcctttctgatatgctgccaactacc
agaggtcagccttccaccagcgctcacagcctagccagaagggtctccatctatcttgac
aggagtaaacaaggcggtgcaggcatggttgtagactgggagcaagaaaccggtctcctt
atgacgtctggagatgtgcgagttatccgaatctgggacactgacagagagatgaaggtc
caggacatcccgacaggagcggacagctgtgtgaccagcttgtcttgtgattctcagcgt
tcgctcattgtcgctggtctgggggacgggtccgttcgagttttcgataggagaatgggt
ccaaacgaatgtcgcatcatgacctacagagagcacggcgcctgggtggtcaaagctcac
ctgcagaaagagtcggatggacatataatcagcgttagtgtcaatggagacgttcgattc
tttgagccccgcactcctgactctgttaacgtgctgcagacagtgaaggggttaacagcg
ctcgacatccacccgcaggctaacctgttcgcttgtggctcaatgaaccagttcatcgca
gtgtataatgccaacggtgatgtgatcagcaacatcaaatattatgacggcttcatggga
caaagaatcggggcaatcagctgtttagccttccatcctcactggcctcacttggcagtg
gggagcaatgattactacatgtccatctactcagctgagaagaggctcagataa
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integrated database retrieval system
