Syngnathus scovelli (Gulf pipefish): 125968750
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Entry
125968750 CDS
T08785
Symbol
myo1f
Name
(RefSeq) unconventional myosin-If isoform X1
KO
K10356
myosin I
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125968750 (myo1f)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125968750 (myo1f)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125968750 (myo1f)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125968750 (myo1f)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125968750 (myo1f)
04147 Exosome [BR:
sscv04147
]
125968750 (myo1f)
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125968750 (myo1f)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Phagocytosis
Others
125968750 (myo1f)
Others
Actin-binding proteins
Myosins
125968750 (myo1f)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
125968750 (myo1f)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125968750 (myo1f)
Exosome [BR:
sscv04147
]
Exosomal proteins
Proteins found in most exosomes
125968750 (myo1f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
SH3_1
SH3_2
SH3_9
nSTAND3
IQ_SCN5A_C
NPHP3_N
AAA_16
ABC_tran
IQ
Microtub_bd
RapZ-like_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
125968750
NCBI-ProteinID:
XP_049576087
LinkDB
All DBs
Position
10:complement(1268331..1276422)
Genome browser
AA seq
1087 aa
AA seq
DB search
MAKYHWQSQNVKQSGVDDMVLLSKITEDAIVENLKKRYTDDYIFTYIGPVLISVNPFKQM
PYFSDREIELYQGAAQYENPPHIYALTDNMYRNMMIEGENQCVIISGESGAGKTVAAKYI
MGYISKVSGGGGKVQHVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPD
GGKISNFLLEKSRVVSQNDSERNFHVYYQLIEGASAQQKEALGIMTPDYYFYLNQSGTYK
VDGTNDSKDFHETMEAMQVIGIPGDIQAQVLQIVAGILHLGNITFIEAGNYGQVESMDLL
GFPAYLLAVDPNRLQEKLTSRKMDSKWGGKSESINVTLNQEQANYTRDALAKALYARVFD
YLVEAINKAIQKPHEEFSVGVLDIYGFEIFQRNGFEQFCINFVNEKLQQIFIELTLKAEQ
EEYVQEGIKWTAIQYFNNKIVCDLIENKLNPPGVMSVLDDVCATMHAKGEGADGTLLQKL
QAAVGTHEHFNSWNSGFVIHHYAGKVSYDINGFCERNRDVLFPDLIELMQSSHHDFIRYL
FPENLNTDKKSRPTTAGSKIKRQANDLVNTLMKCTPHYIRCIKPNETKRPKDWEESRVKH
QVEYLGLRENIRVRRAGFAYRRVFTKFLQRYAILTAETWPRWSGPEQQGVLHLLRSVNMD
NDQYQMGRSKVFVKNPESLFLLEEMRERKFDTFARIIQKAYRRYIAKKKYEQMREEASDI
LYNAKERRKNSINRNFVGDYLGLEQRPELRQFLAKRERVDFADSVNKFDRRFKSIKRDLI
LTPKSIYLIGREKVKKGPEKGQIKEVLKRKLEFGSINGVSLSTRQDDFFILHEADYDSLL
ESNFKTEFLSLLSKRYEDVTRRKLAISFTDRLEFKVKREGWGGGSSRVVTFQNGIGDQAQ
LKPSGKTLTISIGNGLPKSSKPTRKGGQPSRGGGGTQRASRAHQNGATQFARGPKQSDIM
YSSSNNQHRPPQTALPKLGSQRAPRIPTQNHSNQVNMDFLNVPDQGMSGKQRKQSIGQRP
PPAPKPQLRPQGPRCRALYQYIGQDTDEISFEVNDVFDLVKEDPSGWWTGRIRGKEGLFP
GNYVEKI
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaataccactggcagagtcaaaatgtgaagcaaagtggagtggacgacatggtc
ctcttgtccaagatcacagaggacgccattgtggaaaacctcaagaaacgatacacggat
gactacatttttacttacattggccctgtattgatatcagtcaacccattcaaacagatg
ccttatttctctgacagagaaattgaactctaccaaggagcagcccagtatgagaatccc
ccccacatctacgccttgactgacaacatgtacagaaacatgatgatcgaaggagaaaat
caatgtgttattatcagtggtgaaagcggggcaggaaagactgtggctgccaaatacatc
atgggctacatatccaaagtatcaggaggaggcggaaaagttcagcatgtcaaagacatc
atcctgcagtccaatcctctactagaagccttcggtaacgccaaaactgtccgcaacaac
aattccagccgctttgggaaatactttgagattcagttcagcagaggtggagagcccgac
ggtggcaaaatctccaactttctgctggagaagtccagggtggtgagccagaatgatagc
gaaagaaacttccacgtctattatcagctaatagagggcgctagtgctcagcaaaaggag
gccctgggcatcatgacaccggactactacttctacctcaaccagtctggaacctacaaa
gtggatggaaccaatgacagcaaggacttccatgagacaatggaagccatgcaagtgatt
gggatcccaggtgacatccaagcccaggtgctgcagatagttgccggcatcctccaccta
gggaacatcactttcatcgaggctggcaattacggccaggtggagagcatggacttgctg
ggcttccccgcctatctgctcgctgtggaccccaaccgtctgcaggagaagctcaccagc
cgtaaaatggactcaaagtggggagggaagtcagagtccatcaacgtgaccctcaaccag
gagcaagccaactatacacgagatgccctggccaaagcgctctatgcgcgcgtctttgac
tacctggtggaggccatcaataaagccatccaaaaaccgcatgaagaattcagcgtcggc
gtccttgacatttatggatttgagattttccagagaaatggatttgaacaattctgcatc
aactttgtcaatgagaagctccagcaaatcttcattgaactgactctgaaggcagagcag
gaggagtacgttcaagagggcatcaagtggactgcgatccaatactttaacaacaagatt
gtttgcgaccttattgaaaataaactgaaccctccaggcgtgatgagcgtgttggatgat
gtgtgcgccaccatgcatgccaaaggcgagggcgcagatggtactctgctgcaaaagctg
caggctgccgtgggaacccacgagcacttcaacagctggaactcgggctttgttattcat
cactacgctggaaaggtgtcttacgatatcaacggcttttgtgagagaaaccgcgacgtg
cttttcccagaccttattgagctgatgcaaagcagccatcatgatttcatccgctatttg
ttccctgaaaacctcaacacagacaagaaaagtaggccaactacagcaggatccaaaatc
aagagacaagcgaatgacctggtcaacactcttatgaaatgcactcctcattacatccgc
tgtataaaacccaatgagacaaaacggcctaaagactgggaagagagcagggttaagcat
caagtggaatatctcggattacgagaaaacatccgcgtacggagggctggctttgcgtac
cgcagggtcttcactaaattcctgcaaaggtacgccatcctgactgctgagacatggcca
cgctggagcggtccagagcagcaaggagtccttcacctcctccgctccgttaacatggat
aacgaccagtaccaaatgggccgaagcaaagtctttgttaaaaacccagaatcgctgttt
cttttggaggagatgagggaaagaaaatttgacacctttgccaggatcattcagaaggcc
tatagaagatatatcgcaaagaagaagtatgagcagatgagagaagaagcttcagacatc
ctctacaacgcaaaggagaggaggaaaaacagtatcaacagaaactttgtgggcgactac
ctgggtctggagcagaggcctgagctcagacagttcctagccaagagggagcgggtggac
tttgcagactctgtcaacaaatttgatcgaaggttcaagtccatcaagagagatttgatc
ttgacgcctaagagcatctatctgattggtcgagagaaagtgaagaaaggtcccgagaaa
gggcaaataaaggaagtactgaaacgaaagctggagtttgggagcataaatggcgtctca
ctcagtacgagacaggatgacttttttattctgcacgaggcagattacgacagtctgctg
gagtccaacttcaagacggagttcctcagcttgttgtccaaacgttacgaagacgtgacc
aggaggaagctcgccatatccttcacagacagactagagttcaaagtgaagagagaaggc
tggggaggaggcagctccagggtggtgacattccagaatggaataggagaccaggcccag
ctcaaaccttcaggaaagaccctcaccatctcaatcgggaatggactccccaagtcttcc
aaaccaacgaggaaaggtggtcagccgtcacgtggtggagggggaactcagagagccagc
agagcacaccagaatggagcgacccagttcgccagaggacccaaacaatcggatattatg
tattcctcatcgaataatcagcacagacctcctcaaacggccctgcccaaactgggctcc
cagagagctcccaggatacccacccaaaaccacagtaaccaggtcaacatggacttcctt
aacgtgcctgaccagggcatgtcggggaaacaaaggaagcaaagcatcggtcagcggccc
cctcccgctcccaaacctcagcttcgtcctcaggggcctcgctgtcgagccttgtatcag
tacatcggccaggacacggacgaaatcagctttgaggtcaatgatgtctttgaccttgtc
aaagaagatccatctggatggtggactggccgaattcgaggaaaagaaggacttttccct
ggtaactatgtggaaaagatttaa
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integrated database retrieval system
