Syngnathus scovelli (Gulf pipefish): 125968756
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Entry
125968756 CDS
T08785
Name
(RefSeq) high affinity choline transporter 1 isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
125968756
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125968756
Transporters [BR:
sscv02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
125968756
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
125968756
NCBI-ProteinID:
XP_049576095
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Position
5:12839068..12857638
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AA seq
549 aa
AA seq
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MTLNVPGLVVMAAFYLLILGTGIWASMRSRKEEKKCKGDGMEITLLAGRNINLLVGVFTL
TATWVGGGFILGIAEATYNPTLGAVWALMPVPYVVTFFLGGFFFAKPMRENKYVTMMDPF
QKKYGNFMSNALILPALIADVLWVARTLVSLGGTMTVILDLSYGYSIVISAVVAIAYTLL
GGLYSVAYTDVIQLILIFISLWVCVPFLLTNPHSVDISLTAYNQTFQAPWVGTVDLDRAG
KWFDDFMLLALGGLAYQAFYQRILSASSYTQAQMTCFASAAFCLVLGIPSVLVGAVAAST
DWNSTIYGLPTPYERGEAGSILPISLQYLTPMYVSIIGIGAVAAAVMSSMDSALLSSASL
FSSNIYKNIIRKQASDREMQWVIRISVVVVGLAGTGLTFLDSSVLVFWLVGVDMSYTIMF
PQLVCVLFFKASNGYGAIVGFLLGIIMRILSGEPLVGLPPIIRFPNCRLDAEGKLTQFFP
FRTVIMLVSLVTIMVVSWLMTLAFDNDLLPEKWDVYKVKRKQSKPVEERPTEDNEELAVS
KQLLDTTSC
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgactttaaacgtgccgggtctggtggtgatggcagccttctacctgctgatcctggga
acaggcatttgggcttccatgcgttccaggaaggaggagaaaaaatgcaaaggagatgga
atggagatcacactacttgctggacggaatattaacttgctcgtgggcgtcttcactctg
acagccacgtgggtaggaggaggttttatcttgggtatagcggaagccacatacaatcca
acattgggagcggtgtgggctctcatgccagtgccttatgttgtcacatttttcttgggt
ggctttttctttgcaaagcccatgagagagaacaagtatgtgacaatgatggatcctttc
cagaagaagtatgggaactttatgagcaatgctctgatcctccctgcactgatcgctgat
gttctgtgggtggcacgcacacttgtcagcctgggtggaactatgactgtgatccttgac
ctttcttacggctactccattgtcatctctgccgtcgttgccattgcctacacgctcctg
ggagggctttactctgtagcttacacagatgtgatccagctcattctcatctttatcagc
ctgtgggtgtgcgtccctttcctgttgaccaaccctcactctgtggacatctcgctgacg
gcctacaaccagaccttccaggctccctgggttggcacggtggacctcgatcgagccggc
aagtggtttgacgacttcatgctgctggctctcggaggtttggcctaccaagcgttctac
cagaggatcctgtcggcctcatcttacacccaggctcaaatgacctgctttgcctctgct
gccttctgcctggtgctgggtatcccctctgtgctggtgggagctgtggctgcatcgact
gattggaactcgacaatctatggactgccaactccatatgagcgtggcgaagcaggttcc
atcctccccatctccctgcaatacctcacgcccatgtacgtgtctatcattgggatcgga
gctgtagccgccgctgtcatgtcctccatggactcagccctgctgtcctctgcgtcacta
ttctcctccaatatctacaagaacatcatccggaagcaggcatcggaccgcgagatgcag
tgggtgatccggatctcggtggtggttgtcggtctggctggcactggcctcaccttcttg
gacagcagtgtgctggtcttctggctggtgggcgtagacatgtcctacaccatcatgttc
cctcagctggtctgcgtgctcttcttcaaggcgtcaaatggttacggggccattgtgggc
ttccttctgggaatcatcatgagaatcctgagcggcgagcccctcgtcggcctgccgccc
atcatccgcttccccaactgccggctggatgctgaaggcaagcttactcagttcttcccc
tttcgtactgtgatcatgctcgtctcgctggtcaccatcatggtagtgtcttggctgatg
acattggctttcgacaacgatcttttgccggaaaagtgggatgtgtacaaggtcaaacgc
aagcaaagcaagcctgtagaagagaggcccaccgaagacaacgaagaacttgccgtatcc
aagcagctactggacaccaccagctgctga
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