Syngnathus scovelli (Gulf pipefish): 125968760
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Entry
125968760 CDS
T08785
Name
(RefSeq) tubulin beta-4B chain
KO
K07375
tubulin beta
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04145
Phagosome
sscv04517
IgSF CAM signaling
sscv04540
Gap junction
sscv04814
Motor proteins
sscv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125968760
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125968760
09144 Cellular community - eukaryotes
04540 Gap junction
125968760
09142 Cell motility
04814 Motor proteins
125968760
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125968760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125968760
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125968760
04147 Exosome [BR:
sscv04147
]
125968760
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
125968760
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
125968760
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125968760
Exosomal proteins of colorectal cancer cells
125968760
Exosomal proteins of bladder cancer cells
125968760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
125968760
NCBI-ProteinID:
XP_049576099
LinkDB
All DBs
Position
5:12418330..12423010
Genome browser
AA seq
444 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGSYQGEDDLQLERINVYYNEASGGTYV
PRAVLVDLEPGTMDSVRSGPFGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMTTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSTQYRALTVPELTLQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQEATAEEGDFEEEEEEELA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcgttcatttgcaagctggccaatgtggaaatcaaattggagcaaagttt
tgggaagtgatcagtgacgagcatggcattgacccaactggatcctaccaaggagaggat
gacctccaactggaacgaatcaatgtctactacaatgaggcttcaggaggaacgtatgtc
ccaagggcggtcttggtggatttggagccaggcaccatggattctgtccggtccggtcca
tttggaaagatatttagaccggacaactttgtctttggccagagtggagcaggaaataac
tgggccaaaggtcactacactgaaggagccgagctggtggactcggttctggatgtggta
aggaaggaggccgagggatgcgactgccttcaggggttccagctgacgcattctttgggt
ggtggtaccggatctgggatgggaactctgctcatcagcaagatccgtgaggagtacccg
gaccgcatcatgaccaccttcagtgtggtgccctctccaaaggtgtccgacacagtagtg
gagccctacaacgccaccctctcggtccaccagcttgttgagaacacagacgagaccttc
tgcattgataatgaagccttgtatgacatctgcttccgtaccctcaagctgaccacaccc
acatacggagacctcaaccacctggtttcggccaccatgagtggtgtgacaacctgcttg
cgttttcccgggcagctgaacgcggacctccgtaaactggccgtcaacatggtgccgttc
cctcgtttgcacttctttatgccgggcttcgctccgctcactagcagggggagcacacag
tacagagccctcactgtgcccgaactaactctgcagatgtttgatgccaaaaatatgatg
gctgcttgtgacccccgccatgggcgctacctcactgtagctgccatatttcgcggccgc
atgtccatgaaggaggtggatgagcagatgctgaacgtgcaaaacaagaacagcagctac
ttcgtcgagtggatccccaacaacgtcaaaacggccgtttgcgacatcccgccgcgtggc
ctcaagatgtcctccaccttcatcggtaacagcactgccatccaggagctgttcaagcgg
atctctgagcagttcactgctatgttccgccgaaaggcttttctccactggtacactggc
gagggcatggatgaaatggagttcactgaggcggaaagcaacatgaatgatttggtgtcg
gagtatcagcaataccaggaagccactgctgaggagggagattttgaagaggaggaggag
gaggagttggcctaa
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