Syngnathus scovelli (Gulf pipefish): 125968857
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Entry
125968857 CDS
T08785
Symbol
abcg2d
Name
(RefSeq) broad substrate specificity ATP-binding cassette transporter ABCG2d isoform X1
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv02010
ABC transporters
sscv04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125968857 (abcg2d)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
125968857 (abcg2d)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125968857 (abcg2d)
04147 Exosome [BR:
sscv04147
]
125968857 (abcg2d)
04090 CD molecules [BR:
sscv04090
]
125968857 (abcg2d)
Transporters [BR:
sscv02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
125968857 (abcg2d)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of breast milk
125968857 (abcg2d)
CD molecules [BR:
sscv04090
]
Proteins
125968857 (abcg2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
SMC_N
ABC2_membrane_3
AAA_23
AAA_29
RsgA_GTPase
DUF87
nSTAND1
Motif
Other DBs
NCBI-GeneID:
125968857
NCBI-ProteinID:
XP_049576286
LinkDB
All DBs
Position
5:2500417..2505756
Genome browser
AA seq
670 aa
AA seq
DB search
MTGYKMERGCHINIAMVDDVGVNGLMGSRVATVTEPPAKQLCGSTVSFHEVGYKVHEKNG
FFWKNTSSTRQILLELNGIMRPGLNAILGPTGSGKSSFLDILAARKDPSGLSGEVLIDGA
PQPPNFKCLSGYVVQDDVVMGTLTVRENLRFSAALRLPARVSEREKEARVNHLITELGLA
KVADCKVGTQMTRGISGGERKRTNIGMELIIDPPVLFLDEPTTGLDASTANSVLLLLRRM
ANQGRTIIMSIHQPRYSIYRLFDSLTLLVGGKMVYHGPAPNTLDYFANIGYSCEPHNNPA
DFFLDVINGDFTVTSMSKVSLSEELNLDVSSSRASMEERLVEEYKKSSYCSDTLVQLQRI
TQDKRHSAPPASRTVTYITSFGHQMRWVLHRTFQNLLLNPQTSVAQVAVHIFLALVVGAI
FFRVKDDQSGIQNRMGALFFITTNQCFSTVSAAELFIAERKLFTHEYISGYYRVSVYFLS
KVLSDMVLRTVTSVIFSCGVYYMIGLKCTLAAFSVFTLTVTLVAYTATAMTMAISADQTV
VALANIFMTITFVFMMIFSGLLVNLPSVMDWLAWLKYFSIPRYGLAALKINEFVGLKFCQ
NTNMAAVASSCNCSVATKVGHTCTGEQYLDYLGSRYDTWGLWQNHVALAVMLVAFLLISY
LKLRYMKKFT
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgacaggatacaagatggagcgaggttgtcacatcaacatcgcgatggtggacgacgtc
ggcgtcaacggcctgatgggttcaagggtcgccacggttacggagccgccggccaagcag
ctctgcggctccaccgtcagctttcacgaggtgggctacaaggttcacgagaaaaacggt
ttcttctggaaaaacacctcaagtactcgccagatactgctggaactcaatggtatcatg
aggcctggcctgaacgcaattctcggccccacaggaagtggaaagtcatcttttttggat
attctcgctgcgaggaaagatccctctggcctttcgggggaagttttaatcgatggagcg
ccgcaaccacctaacttcaaatgtctctctggctacgtcgtccaggacgacgtggtcatg
ggaacgctaaccgtgagagagaatctccgtttctcagcagcgttgcgtctacccgcccgc
gtgtcagagcgcgaaaaagaggcccgcgtcaatcacctcatcacggaactcggcctcgcc
aaggtggccgactgcaaggtgggcactcagatgactcgtggcatctcaggaggtgagagg
aagcggaccaacattgggatggagctgatcatcgaccctcctgtgctctttttggacgag
cccaccacggggctggacgccagcacagctaactctgtcctgctattgctacgaaggatg
gccaatcaagggagaaccatcatcatgtccatccaccagcctcgctactccatctacaga
ctctttgactcgctcactctgttggtcggaggcaagatggtgtaccacggaccagcacca
aacacattggattactttgcaaacattggatattcctgcgagccccacaacaacccagct
gacttttttctggacgtgatcaatggagacttcactgtcaccagcatgtccaaagtcagt
ctttctgaagagttgaacttggatgtgagcagctccagagcaagcatggaggagcgtctg
gtggaggagtacaagaagagcagctattgcagcgacacgctagtccagctgcaacgcatc
actcaagacaagcgacactcggcgccgcccgcctcccgcaccgtcacctatatcacctca
tttggccaccagatgcgttgggtactccacagaaccttccagaacctcctgctcaaccca
caaacgtctgtggcgcaggtggccgtgcatatattcctggctctcgttgtgggagccatt
ttcttcagagtcaaagatgatcagagtggcatccagaacaggatgggggcgctcttcttc
atcacgaccaatcagtgtttcagtacagtgtcggcggccgagctcttcatcgctgaacgg
aagctcttcacgcacgagtacatcagcggctactacagagtatccgtctatttcctgtct
aaggtgttgtccgacatggtcctgcgcaccgtcacttccgtcatcttcagctgcggtgta
tactatatgatcgggctgaagtgcaccttagctgcattctctgtgttcacgctaacggtg
acgttggtggcgtacacggccaccgccatgaccatggctatctcggcagaccagacggtg
gttgcgctcgccaacatcttcatgaccatcacctttgtcttcatgatgatcttctcgggt
cttctggtgaaccttccgagcgtcatggactggctggcgtggctcaagtatttcagtatt
cctcgctacggccttgcggctctgaagatcaacgagtttgtggggttaaaattctgccag
aataccaacatggccgccgttgcatccagttgcaactgcagtgtggcaaccaaggttgga
catacatgtacgggggagcagtacttggactatttggggagcaggtacgacacatggggc
ttatggcagaaccacgtagcgttagccgtcatgctagtggccttcctgctcatttcatac
ctgaaacttcgctacatgaagaagttcacctaa
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