Syngnathus scovelli (Gulf pipefish): 125968885
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Entry
125968885 CDS
T08785
Symbol
rfx2
Name
(RefSeq) DNA-binding protein RFX2 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125968885 (rfx2)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Other basic domains
RF-X
125968885 (rfx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
HisKA
V18-19
Motif
Other DBs
NCBI-GeneID:
125968885
NCBI-ProteinID:
XP_049576342
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All DBs
Position
10:complement(1227315..1241880)
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AA seq
733 aa
AA seq
DB search
MQSSEGGSDTSPSVAALRTSSSAQAPVVQPVPASQQRALVQATGSVQKGGQVQQLSVSRA
QQVPPQVQQSQHVYPSQVHYVGEGGEAVYTNGTIRTAYYNPEAQLYGQSSGGSYFDSQAG
GGAHVATVVSSASGGVPPHSMVGIAMDVSSSHIISSGSTYLIHGGNMEGSRNHISHSSRS
SSAMVQMEIENLQKSEGIACHKSSLLNSHLQWLLDNYETAEGVSLPRCSLYNHYLRHCQE
QKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDTQYMAM
RQQPVHQKQRFKPLQKVDGMPDNLCVNSHCNNTPEQSVAAQSQHHQQYIDTAHSLPEFPA
PDVGTQPLPERITLNDIKKLQSLYRDHCEATLDVVMNLQFHYIEKLWQTFWYSTATSSDG
STTIASSDDELEGVLPREKLVNLCKYEPVRLWMRSCDHILYQALVEILIPDVLRPVPSTL
TQAIRNFAKSLEGWLTNAMTSFPQEIIRTKVAVVSAFAQTLRRYTSLNHLAQAARAVLQN
TSQINQMLSDLNRVDFANVQEQASWVCQCDESVVQRLEQDFKVTLQQQSSLDQWATWLDN
VVTQVLKPHQGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMF
YLVEHRVAQATGETPIAVMGEFSDLTSMMPSLMEKDVSFSDELSDLGSDADASRSEPAVK
RERIEMSHPLQEM
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctccgagggcggctccgacacttcgcccagcgtggcggcgctgcggacgtca
tcttcggcccaggcccctgtggtacagcccgtcccggcctcccaacagagagcgctggta
caagccacaggctcagttcagaaaggaggacaagtacagcagctttcagtatccagggct
caacaggttccacctcaggtgcagcaatcacagcatgtctatccgtcccaggtgcactac
gtcggggaaggcggagaggctgtttacaccaacggaacaattcgcacggcctactacaac
ccggaggctcagttgtacggccaaagcagcggggggtcctactttgactcgcaggccggc
ggcggagcgcacgtggccaccgtggtctcttctgccagcggtggggtgccgcctcatagc
atggtgggcatcgccatggacgtaagcagcagccatatcatctccagcggcagcacctat
ttgatccacggaggaaacatggaaggaagccgcaaccacatatctcactcttctcgctcc
tcttcggccatggttcaaatggagattgaaaacctccaaaagtctgaaggaattgcatgt
cacaaaagcagcctgctcaacagccatctccagtggctgctggacaactacgagacggcg
gagggcgtgagcctgccccgctgctccctctataaccattacttgcgccattgccaggag
cagaaactagatccggtcaacgctgcctcttttggcaagctgatccgctccgtcttcatg
ggcctcaggacccgacgcctcggaaccagaggcaactcaaagtatcattattatggcatt
cgggtgaagccagactctccgctcaaccggctgcaagaggacacccagtacatggccatg
aggcagcagcccgtccaccagaaacaaaggttcaaacctctgcagaaggtggacggaatg
cccgacaacctgtgcgtcaactctcattgtaacaacactccggaacagtcggtggcagct
cagagccaacaccatcagcagtacatcgacacagcccacagtttgcccgagtttcccgct
cctgacgtgggcactcagcctctgccagagcgcatcactttgaatgacattaagaagctg
cagagcctctacagagaccactgcgaggccacactggatgtggtgatgaacctccagttc
cactacattgagaaactctggcagaccttttggtactcaacagcgacatctagtgacggg
agcaccaccatcgccagcagtgacgatgaactggaaggtgtgctgcccagagagaaactg
gtgaatctttgtaaatatgaaccagtacgactatggatgaggagctgcgatcacatcctc
taccaggccttggtcgagatcctcatcccagatgtgctgcgccctgtccccagcactctc
actcaggccatcaggaactttgccaagagtctggagggatggctgactaacgccatgacc
agcttccctcaagaaatcatccgcactaaggtggcagtggtcagtgcctttgcgcagacg
ctaagacgttacaccagcctcaaccacctggcccaggcggcgcgtgccgtcctccagaac
acctcacagatcaaccagatgctctccgacctcaaccgggttgactttgctaacgtccag
gagcaggcgtcctgggtgtgccagtgcgacgagagcgtggtgcagcgtctggagcaggac
ttcaaagtcaccctgcagcagcagagttctctggaccagtgggccacatggctggacaac
gtggtcactcaggtcctcaagccccaccagggcagccccagcttccccaaggcagcgcgg
cagtttctgctgaaatggtccttctacagctccatggtcattcgagacctgactctgcgc
agtgccgccagtttcggttccttccacctgatccgcctgctgtacgatgagtacatgttc
tacctggtggagcaccgcgtagctcaggccactggagagacgcccatcgctgtcatgggg
gagttcagtgacctgacctccatgatgccatcactcatggaaaaagatgtgtccttctcg
gacgagctgagtgacctgggtagcgacgccgacgcgtcccggagcgagccggccgtgaag
cgggagcgcatcgaaatgagccaccctctgcaggagatgtga
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