Syngnathus scovelli (Gulf pipefish): 125968894
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Entry
125968894 CDS
T08785
Symbol
samd1b
Name
(RefSeq) sterile alpha motif domain-containing protein 1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125968894 (samd1b)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
125968894 (samd1b)
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Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
125968894
NCBI-ProteinID:
XP_049576353
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Position
5:complement(8900215..8905857)
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AA seq
566 aa
AA seq
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MSGPNKYREWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRAELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSEDPVSNNNGDSALSFTDQEDDSEPSPSQLAEASNKRG
APSSPRSGNRSISGDGPATARLVDEENASAAAGAQQVRPGTGRNDALGRDKQPGPSVDDA
PNQTCAGGASTRKHAVAPQPQLPGEGGGIGSDLDLGDRVVASVRSLSERSHRGGDAAAAG
GKGPVKPLGLKEILGYLGSQERLFEEKLTRGKVKVVMEREVARGRLRRTRCGNITLPLRG
MTTTETFAAENLAKSALQPAIKEMEEPSEEDAVEEVNEDPRSSNEEEGQSLVAMTTEAAP
IGKVSEDSKIWKASEEESLCHPHRDEVMDPLSRNGCSPSLGAPPSMCFTAYVEKRSGIPD
QPLMDMQSQSHMQHTRSRFNGIECKPEAGVSSCLLTPTASPRDTGLSEEQEMNDSVNNGG
FVKMGGAGGSPVDWTVADVVTYFTIAGFPEQAAAFGTQEIDGKSLLLMQRNDVLTGLSIR
LGPALKIYEHHVKVLQKTHFEDEECS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtccggacccaacaagtaccgagagtggatcctggaaacaatcgactctctccgctcg
cggaaagcgcgtccggatctggaaaggatttgtcgaatggtccgaaggcgacacgggtca
gacccggaccgaaccagggcagaactggaaaaactgatccaagagcagactgtgcttaaa
gttagctataagggctccatctcgtaccggaatgcagccaaggtgcagaggaaaagcaga
aagaagagtgaagaccctgtgagcaacaacaacggcgacagcgcgctcagcttcaccgac
caggaggacgactcagagcccagcccgtctcaactggcagaggccagcaataagcgcggc
gctccctccagcccgaggagcggaaacaggagcatcagcggcgacgggccggcaacggcc
cgtcttgtagatgaagagaacgcaagtgcagccgcgggagcacagcaagtccgtcctggt
accggccgcaacgatgcacttggacgagacaagcagccgggtccgtccgtggatgacgcc
cccaaccaaacttgcgcggggggcgccagcacacgcaagcacgcagtggcccctcagccc
caacttccaggggagggaggtggcatcggatccgacttggacctgggcgaccgggtggtg
gcttcagtccgcagcctgtccgagaggagccaccgggggggcgacgccgccgctgccggt
ggcaaaggccccgtgaagccactggggctcaaggagattttgggctacctgggcagccag
gagcgtctcttcgaggagaagctgaccaggggcaaagtcaaagtggtcatggagagagag
gtggcccggggtaggctgcgcaggacccgctgcgggaacattactcttcctctgagggga
atgacgacgacggagacgttcgccgccgagaatcttgcaaagagcgcgctgcagcccgcg
ataaaggagatggaagaacccagtgaagaggatgctgtggaggaagtgaatgaggatccc
aggagttctaatgaggaagaaggacaatccctggttgccatgacaaccgaagcagctcca
attgggaaagtcagtgaagatagcaaaatctggaaagcgtcggaagaggagagcctctgt
catccgcatcgggacgaagttatggatcccctcagtaggaatgggtgttcaccttctttg
ggtgctcctccatctatgtgctttacagcatatgtggaaaaaagatctgggatacctgat
cagccacttatggatatgcagagtcagagccacatgcagcacacccggtcacgcttcaac
ggtattgaatgtaagccagaagcaggtgtgtcatcatgcctactcacacccaccgcctcc
ccgagagacactggcctttctgaagaacaagagatgaacgatagcgttaataatggaggg
tttgtaaagatgggaggggccggggggagcccggtggactggactgtggctgatgtggtc
acttattttacaatagctggtttccctgagcaggctgctgcctttggtacacaggaaatc
gatgggaagtctcttctcctcatgcagcgtaatgacgttttgactggcctatcaatcagg
cttggccccgccctcaagatttacgagcatcacgtcaaggttttgcaaaaaacacacttt
gaagatgaagaatgttcatga
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