Syngnathus scovelli (Gulf pipefish): 125968912
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Entry
125968912 CDS
T08785
Symbol
pus10
Name
(RefSeq) tRNA pseudouridine synthase Pus10 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125968912 (pus10)
Enzymes [BR:
sscv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
125968912 (pus10)
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125968912 (pus10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
125968912
NCBI-ProteinID:
XP_049576420
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All DBs
Position
5:1270869..1275326
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AA seq
544 aa
AA seq
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MLPLKQKDKEIIKKLLASGCCARCVLRFCCIGVPDAYRHTPPETLKELRAFVNASEDGTS
SESTQEEKNSSQNAAEFEPASKRSKLEEPAEEPGVCVVCLGVLQHLSDVSQAVQIADAVR
KEKYQVDTLVLSISLPAQMCVREHSCWLHVKDQVRAKCCVLGRDDVIQVKEAFKWIMQDL
LAQELAGVAVATKSALEVSVGFTHPETDADCYFLASTCPDCFKATKNKQSVFTRMAVVKA
LEKIPDSKFIKHSPCPPSRPGSSCTPQDVQCVHVSVFVAGRYNKFCRSLPQTPWLIDGQR
RMESSVEELIAAPVLTAFGAQGFNFSSSGREDVDVRTLGNGNRRQTRCLPRIIVTMMTTP
PSPRALPGRPFALELLNPRKSKLCEEDMKSVQQLINASSEKIRVRDLQMVSRDAMSRMKE
GEEEKTKSYLALVWTQKSIQKDDIAFINHIKDLTIDQKTPLRVLHRRTLAVRQRLIHSMN
ASLLDEHHFRLSLKTQAGTYIKEFVHGDFGRTTPNLCQLLDTHTDILELDVQSVDVDWPP
ALPD
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccctgaagcagaaggataaggagatcatcaagaagctgttggcctcaggttgc
tgtgctcgctgcgttctccggttctgctgcatcggagtgccggacgcctataggcacaca
ccaccggaaacgctcaaggagcttcgagctttcgtgaacgcctcagaggacggcacatcg
tccgagtcgacacaggaggaaaagaacagctctcagaatgccgcagagttcgaaccggcc
agcaaaagaagcaaactggaggagccggcggaggagccgggcgtgtgcgtggtgtgcttg
ggcgtcctccagcatctcagcgacgtcagccaggctgtgcagatcgccgacgccgtcaga
aaggaaaagtaccaagtggacactttggtgctgtccatctcgttgcctgctcagatgtgc
gtccgcgagcattcttgttggcttcatgtgaaggatcaagtgagagccaaatgctgcgtg
ctgggccgcgatgatgtcatccaggtgaaggaagccttcaagtggatcatgcaggacctg
ctggcccaggagctggccggcgttgccgtggctaccaagagtgcgctggaggtcagcgtg
ggcttcacccacccggaaacggacgccgactgctacttccttgcctcgacttgtcccgac
tgcttcaaagccaccaagaacaaacagtccgtgtttactcggatggcggtggtgaaagcg
ctggagaagattccggacagcaaattcatcaaacactcgccatgcccgccgtcccgtccg
ggcagcagctgcacgccgcaggacgtccagtgtgtccacgtgtccgtctttgtggcaggg
cgctacaataagttctgccgcagtttgccgcagacgccgtggctcattgacggccagcga
cggatggagtcgtccgtggaggagctcatcgccgcgcccgtgctcaccgccttcggagcg
caagggtttaatttctcgtcatctggccgtgaagacgttgacgtccgcacgctgggaaat
ggtaatcggcgacaaacacgctgccttcctcgtatcatcgtcaccatgatgaccactccg
ccgtctcctcgtgctcttccaggtcgaccgtttgcgctggagctgctgaacccacgcaag
agcaaactgtgcgaggaggacatgaagagcgtgcagcagctcatcaacgcgtcttcggag
aagatccgagtccgagatctgcagatggtcagcagagatgccatgagtcgtatgaaggag
ggcgaggaggagaagaccaagtcctacctggcgttggtttggacgcaaaagtccatccag
aaagacgacatcgccttcatcaaccacatcaaggacctgacgatagaccagaagacccct
ctgagggttctgcaccgtcgcaccttggcggtgcgccagcgtctgatccacagcatgaac
gccagcttgctggacgagcaccacttccgactcagcctcaagacgcaggccgggacctac
atcaaggagtttgtccatggagactttgggcgtactacaccaaacttgtgtcagctgctg
gacacacacacggatatcctagaacttgatgtacagtccgtcgacgtggactggcctccc
gccctgccggactaa
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