Syngnathus scovelli (Gulf pipefish): 125968953
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Entry
125968953 CDS
T08785
Symbol
ctnnd1
Name
(RefSeq) catenin delta-1 isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125968953 (ctnnd1)
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Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_2
HEAT_EZ
Atx10homo_assoc
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
125968953
NCBI-ProteinID:
XP_049576495
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Position
5:complement(11707608..11729619)
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AA seq
937 aa
AA seq
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MEQCASTASLLASVREQERQFEMLSRALEEERRSCAGTLPRPLPNMQNGRLPCDADVERL
TLNEGYVNGTHHFRMEPGQMVQETYTVEQDHQESNPMLSVETNDDGTTRRTEITVKKVVK
PIPTRTVIPSVSDTLSLDGGGSMTGMGAYIPPMDRGYRQAPGVGAPMEYPTQTVPRNYQY
GPPGGYEDYRAGPPSEAYASLSRGARIDDRYRPVHPDGYRTLDPSYRAPSRNQIDPYAAQ
PQVGRMGSAMELSSVPRFVPESYGMEDDRRSMGYDESDYGMGHPMHYSTVPRNIHGFPQG
LPRRTGSYEGTLDGDMSGPGDMYYWGGGAPMAQGERGSMASLDSTLRKGPGPSGWRQPEL
PEVVAMLNYRLDPVRSNAAAYLQHLTYKNDKVKSDVRRLKGIPALVSMLDNPNKEVHYAA
CGALKNISYGKDPDNKIAIKNCDGVPALIRLLRKTHDQDLTDLITGTLWNLSSHDSVKME
IVDHALHALSDEVMVPRSGWERGSNGGGGEENCKPRHLEWETALTNTAGCLRNVSSERSE
ARRKLRECTGLVDSLMYIVQSQIDCKDVDNKLIENSVCLLRNLSYHVHREIPGCERYQEA
APINQGPAPSSQKSGCFSSRKSKDEWFSKGKKDEDAAADTIDIPKRTTPAKGYELLFQPE
VVRIYTSLLRESKNPTVLEASAGAVQNLCAGRWTYGRYIRALLRQEKGLPMMTELLAHGN
DRVVRAMSGALRNLAIDARNRDLLGKHAVPHLVANLPGGGQSQPVRALSEATVVSVLSTL
HEVLGSSLEAAKTLRASQGIERLVLINKDGNRSEREVRGAGLVLQTVWGYKELRRTLEKD
GWKKTDFMVNLNPPSNNTRTNGGYEDSTLPLIDKGVKGEREMIPMNDMGPDAYSTLDQRG
RRNTLDNAIEPDDKDTVQGVRYGERQATLPLMDSYDG
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtgtgcaagtacggcctccctgctggcttccgtgcgggagcaggagaggcag
tttgagatgctgagccgagctctggaggaggagcggaggtcgtgcgccggcactttgccc
cgcccactccccaacatgcagaacggccgccttccttgtgatgcagacgtagagaggcta
acacttaacgaaggttacgtcaacgggacacatcacttcaggatggagcctggtcagatg
gtgcaggagacctacacagtggagcaagaccaccaggagtccaacccaatgttatctgtg
gagaccaatgatgatggcaccacaagacgcacagaaatcacggtaaaaaaagtagtaaag
cccattccaactcgtacagtcatcccctcggtatccgacacgctttccttggatggtggt
ggttcgatgactggtatgggagcttacatcccacccatggaccggggctacaggcaggca
cctggagtcggtgcacccatggaataccccacccaaactgtgcctcgcaactaccaatat
ggacctccaggtggctatgaggactaccgtgccggacccccatctgaagcatacgcaagc
cttagcaggggtgctcgcattgacgatcgctatagaccagtccatccagatggttatcga
actctggatccgagctacagagcacccagcaggaaccagatagatccatatgctgctcaa
ccacaggttggacgaatgggaagtgcaatggagctttcttcagtcccaaggtttgttcca
gagtcgtacggaatggaggatgatcggcgaagtatgggctatgatgagtctgattatggt
atgggacatccaatgcactacagcaccgtgccccgtaacatccatggctttccccaaggg
ctaccacgtcgaactgggagctacgagggcactctggatggtgatatgagtggtcccggg
gacatgtactattggggaggaggtgccccgatggcacagggcgaaagaggaagcatggct
tcattggacagcactctgagaaaaggcccaggcccaagtggctggcgtcaaccagagttg
ccagaggttgttgccatgcttaactataggctggatccagtcaggagcaatgctgctgca
tacctgcagcatctcacttataagaatgataaggtgaagtcagatgttcgacgtctgaaa
ggcatcccggcattggtatcaatgcttgacaacccaaacaaagaggtgcactatgcagct
tgtggagctctaaagaacatttcgtatggtaaagatccagacaacaaaattgccatcaag
aactgtgatggtgtgcctgccttaattaggcttttgagaaagacccatgaccaggacctt
actgacttaatcacagggacactttggaacctgtcatcccacgactctgtaaaaatggag
attgtggaccatgcattacacgccctctcggatgaagtgatggtgcctcgttcaggctgg
gagcgtgggagcaatggtggtggaggggaggaaaactgtaagcccagacacctggagtgg
gagacggctctcaccaatacagcgggctgcctgagaaatgtgagttcggagcgtagtgaa
gcaagacggaagctgagggaatgcacaggattggtggattctcttatgtacatcgtccag
tcccagattgactgtaaagatgtcgataacaagctcatagagaacagtgtgtgtctgctg
agaaacctatcctatcacgtgcatcgtgaaatccccggatgtgagcggtaccaagaagct
gcgcctatcaaccagggcccggccccatccagccagaagagcggttgtttcagctcacgc
aagagtaaagatgagtggttttccaaaggaaagaaagatgaggatgcagctgcagacaca
atagacattccaaagagaacgacacctgctaaaggctatgaacttttgttccaaccagag
gtggttcgcatctatacctctctgctgagggagtcaaagaaccccaccgtgctggaggcc
tcagcaggagctgttcagaatttgtgtgctggacgttggacgtatggccgttacatccgt
gccttgctacgccaagagaaaggtctgcccatgatgactgaactactggcgcacggcaac
gacagagtagttcgagcgatgtcgggagcgctccgtaatctggcgatagatgctcgtaac
agagacctactgggcaaacatgcagtgcctcacctagtggccaaccttcctggtggcggt
cagagtcagcccgtgcgagcactatcagaagcaacagtagtgtctgtgttgagcacgctt
catgaggtgctgggctctagcttggaagctgcaaagactctcagagcctcacagggaatt
gagaggctagttctcatcaacaaggacggtaatcgttcagagagggaagtgcgtggggct
gggctcgtactgcagactgtatggggctacaaggagctgcggcgtactttggagaaggat
ggatggaaaaaaacagacttcatggtgaacctaaaccctcccagcaacaacacacggacc
aatggaggatatgaggacagcactttgcccctcatagataaaggtgtcaaaggtgaacga
gaaatgattccaatgaatgacatgggaccagacgcctactccacactggaccaacgaggg
agaaggaacactttggacaacgcaattgaacctgatgataaagatacagtacagggagtg
aggtatggtgaaaggcaggccactttgcctctaatggattcttatgatggttag
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