KEGG   Syngnathus scovelli (Gulf pipefish): 125968993
Entry
125968993         CDS       T08785                                 
Name
(RefSeq) RNA exonuclease 5 isoform X1
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    125968993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sscv03009]
    125968993
Ribosome biogenesis [BR:sscv03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    125968993
SSDB
Motif
Pfam: RRM_1 RNase_T
Other DBs
NCBI-GeneID: 125968993
NCBI-ProteinID: XP_049576571
LinkDB
Position
5:290882..295412
AA seq 744 aa
MEPSPSKPFNGKKRKKGADLPPDAAKRARRQRAGADQTERAGPLISVAPQRLRQPIAAEE
LTELLHYAALGDGGAVGRPRSPSWCDVRAQSRVEGVNVVVVEGVSQSDFYNHYLTLSNLR
SRFSNRLTFTSGGSGALLSTIFGTPVEAPRRQDGKLNKALRTHPVVLKYGTSKRGLTAYV
LGQEELIKRRYPVKGLPGFEDFACVDRVDVTDASPLFGLDCEMCLTRRGYELTRVSLVDS
EGKCAMDRLVKPDSPILDYLTKFSGITAAMLDPVKRSLRDVQAELRTLLPRDAVLVGHSV
NNDLAALKLIYPHVIDTSLLYVKEFGQRFKLKLLAEVVLGRSIQTPEREGHCPAEDALAA
LDLAKYFISKSPLKLVEDHLEDLWGLTAEDDDDGDEPAPSSRFADALQRLGRSLCYVGKR
RDITLHPANQLWHNSDKQVLASFLGQSKRPFFSVLSFSSFSSRPPCQDHKVSRRLQQMRV
VFAGPFPAGFSQGEVKRLFSRCGSVRAVQMLSGTHRVHAAVEFKLLEGAALALQLLNGAP
VQGQALKVQRPVSESTLDFELTLEALTNDAVNACRLYTLKRAHAGDGQASASGQLSHESL
TKTFGRFGAVESVTLTGKPGGRAKRAFIEFQRSEGKRAAVESAAELWSEKYVTCPALTPA
HAACGLWRHRGPHQPRGQTEPEHPQNVAERHRMQKLDARLGKVFRSLPEGALSVVLLLAP
HSVEEPPSPGLCFLEIKSKVKGLT
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggagccctcgccctcgaagcccttcaacgggaagaaaagaaaaaagggtgcggatctt
cctcccgatgcggcgaagagggccagaaggcaacgcgccggcgctgaccaaaccgagcga
gcgggcccgctgatctctgtggctccccaacgcctgcggcagcccatcgccgccgaggag
ctgacggagctcctgcactacgccgctctcggggacggcggcgcggtcggacggccaagg
tcgccgagttggtgtgatgtgcgcgcacaaagccgtgttgaaggcgtcaacgtggtggtg
gtggagggcgtgagccaaagcgacttctacaatcactacctgactctgagcaacttgagg
agccgcttcagcaataggttgaccttcacgtcgggcggcagcggcgccctgctttctacc
atcttcggcacgccggtggaagcgccgcggcggcaagacggcaagctgaacaaagcgctg
aggactcacccggtggtgctcaagtacgggacgagcaaacggggcctgacggcctacgtg
ctcggccaggaggagctgatcaagcggcgttaccccgtgaaagggctgcccggcttcgag
gactttgcgtgcgtcgaccgcgtagacgtgacggacgccagccctctctttggactggac
tgcgaaatgtgtctcaccaggaggggctacgagctgacccgagtctccctggtggacagc
gagggcaagtgcgccatggaccggctggttaaacccgacagcccaatcctcgactacctg
accaagttctccggcatcacggcggccatgttggatccggtcaagaggagtttgcgtgac
gtccaagccgagctgaggacgctgttgccgcgcgacgccgtcctggtgggccactctgtc
aacaacgacctagccgctctcaaactgatctatcctcacgtgattgacacgtcgctgctc
tacgtgaaagaatttggccagaggttcaagttgaagctcctggccgaggtggtgctcggc
aggagcatccagacccccgagcgggaaggccactgtccggcggaggacgccttggccgct
ttggatctggccaaatacttcataagcaagtcacctctgaagcttgtcgaggatcacctg
gaggacctttggggtttgaccgcagaagacgacgacgacggcgacgagcccgcgcccagt
agcaggtttgccgatgctttgcagcgtctgggcaggtccctctgctatgtggggaaacgc
cgcgacatcaccctacacccggccaatcagctgtggcacaactcggacaaacaggtgctg
gcctctttcctgggacagagcaagcggcccttcttctcggtgctcagcttttcctccttc
tcgagccgccctccatgtcaagaccacaaggtgagccgccgtcttcagcaaatgcgcgtg
gtgtttgccggaccgtttcccgccggcttctcccagggagaagtgaagcgactcttcagc
cgctgtggctcggtcagggccgtccaaatgctgagcggcacgcacagggttcacgccgcg
gtggagttcaagttactggaaggagccgcgctggcgctgcaactgctcaacggggccccc
gtgcagggacaggccctgaaggttcagaggccggtgagcgagtccacgctggattttgag
ctgactctggaggcgctgaccaacgacgccgtcaacgcgtgccgcctctacacgctcaag
cgcgctcacgcaggggacggccaggcttctgcctccggccaactgagccacgagtccttg
acgaagacgtttggccgctttggcgccgtggagagcgtcacgttaacgggcaaacccgga
ggacgggccaaacgggccttcatagagtttcagcgttccgagggcaaacgagcggccgtg
gaatccgccgcggaactttggtcggaaaagtacgtgacgtgtccggcgctgactccggcc
cacgccgcttgcggcctgtggcggcaccgagggccgcatcagccgagaggccaaacggag
ccggaacatcctcagaacgtggcggagcgtcacaggatgcaaaagctggacgcgcgcctc
ggcaaagtcttccgctctctcccagaaggcgccttgtctgtggtgctgctgcttgctccc
cacagcgtcgaggagccgccgtcacctggcctgtgcttcttggagatcaagtccaaagtc
aaaggtctcacatga

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