Syngnathus scovelli (Gulf pipefish): 125969000
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Entry
125969000 CDS
T08785
Name
(RefSeq) GTP-binding protein 1
KO
K24887
GTP-binding protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125969000
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125969000
03012 Translation factors [BR:
sscv03012
]
125969000
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
125969000
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
125969000
Translation factors [BR:
sscv03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
125969000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
Dynamin_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
125969000
NCBI-ProteinID:
XP_049576594
LinkDB
All DBs
Position
5:complement(574745..583025)
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AA seq
658 aa
AA seq
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MASSLTTGAAPVAAPECTVPASMFAPDRGFSAAAADVHACGGESFEDPEGTDDVLDLSNK
MVLVSPTGEQYDALQRHLRARLDEGCGETIFVVGMGSDGGDYGLSDRDTEASVATVQSLC
EQVEADLILLRERTEVGGKICDFLIRRRVGEQDFLEVRVAVVGNVDAGKSTLLGVLTHGE
LDNGRGFARQKLFRHKHEMESGRTSSVGNDILGFDHEGQVVNKPDSHGGSLDWTEICEKS
SKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVF
AVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVTASNFSSERMCPIFQ
ISNVTGQNIDLLKMFLNLLSSRTAFNDDEPAEFQIDDTYSVPGVGTVVSGTTLRGVIRLN
DTLLLGPDPLGVFIPIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPKL
MPQATWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMSKDCLRTGDKAAVHFRF
IKTPEYLHCEHKLVFREGRTKAVGTITKLLQSVNTQAAKAQQAKLLAGKKMYKDGTEETR
PPSPGGGAAAAALPLKSGGGGRRRGGQRHRGKGGANVLATTPPACAAMAAAAAAAGLV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtccctgacgacaggagcggcaccagtagccgcccccgagtgcacggtgccc
gcttccatgttcgccccggatcggggcttctccgccgccgccgcagacgtccatgcatgc
gggggagagagcttcgaagatcccgagggcaccgacgatgttttggatttgagcaacaag
atggtcttggtgagtccgacaggggagcagtacgacgcgctgcagcgacacctacgagcg
cggctcgacgaaggctgcggcgagaccatttttgtcgtggggatgggctcggacggcggc
gactacggtctgagcgaccgcgacacagaggcgtcggtagccaccgtgcaatcgctgtgt
gagcaagtggaggccgacctcatcctgctgagggagcgcacggaggtgggcggcaagatc
tgcgacttcctcatccgccgccgcgtgggcgagcaggacttcctggaagtcagagtggcg
gtggtgggcaacgtggacgccggcaagagcacgctgctgggcgtgctgacccacggcgag
ctggacaacggtcgaggcttcgcgcgccagaagctctttcggcacaagcacgagatggag
agcggcaggaccagcagcgtgggcaacgacatcctgggcttcgaccacgagggacaggtg
gtcaacaagcccgacagccacggcggcagcctggactggaccgagatctgcgaaaagtcc
tccaaggtgatcaccttcatcgacctggcgggccacgagaagtacctgaagaccaccgtc
ttcggcatgaccggacacctgcccgacttctgcatgctcatggtgggcagcaatgccggc
atcgtgggcatgaccaaagagcacctgggtctggcgctagcgttaaacgtgcccgtgttt
gccgtggtcaccaagatcgacatgtgtccggccaacatactgcaagaaaccctgaaatta
ctccagcggctactaaaatctcccggctgcagaaagattcccgtgttggtgcagaacaag
gacgacgtcatcgtcacggcgtccaacttcagctcggagaggatgtgtcccatcttccag
atctccaacgtgacgggccagaacatcgacctcctgaagatgttcctcaacctgctctcg
tccaggaccgcctttaacgacgacgagcccgccgagttccaaatcgatgacacgtattcc
gtaccgggcgtgggcacggtggtgtcgggcacgacgttacgcggcgtgatccgactcaac
gacacgcttctcctgggtcccgacccgctgggcgttttcatccctatcgccgtcaagtcc
atccaccgtaagagaatgcctgtcaaggaggtgcgcggcgggcagacggcatcctttgcg
ctcaagaagatcaagcgctcgtccatacgcaagggcatggtgatggtgtcccccaaactg
atgccgcaggccacttgggaatttgaggcggagatcctggtgctgcaccaccccaccacc
atttccccgcgctaccaggccatggtccactgcggcagcatccgtcagaccgccaccatc
ttaagcatgagcaaggactgcctgcggaccggcgacaaggcggccgtccacttccgcttc
atcaagacgcccgagtacctgcactgcgagcacaagctggtgttccgggagggccgcacc
aaagccgtgggcaccatcaccaagctcctgcagtcggtcaacacgcaggcggctaaggcg
cagcaggccaagttgctggccggcaagaaaatgtacaaggacggcacggaggaaacgcgg
ccgcccagtcctggcggcggtgccgccgccgccgcgcttccgctcaaatcaggaggcggg
ggacgacggcggggtggccagcggcaccgagggaaaggaggcgccaacgtgctggcgacg
acaccgccggcgtgcgccgcgatggcggcggcggcggcggcggcgggcctcgtttag
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