KEGG   Syngnathus scovelli (Gulf pipefish): 125969107
Entry
125969107         CDS       T08785                                 
Symbol
cfap52
Name
(RefSeq) cilia- and flagella-associated protein 52
  KO
K24728  cilia- and flagella-associated protein 52
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sscv03037]
    125969107 (cfap52)
Cilium and associated proteins [BR:sscv03037]
 Motile cilia and associated proteins
  Other motile cilia associated proteins
   125969107 (cfap52)
SSDB
Motif
Pfam: Beta-prop_EML WD40_CDC20-Fz WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_MABP1-WDR62_1st WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_like NBCH_WD40 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_SPT8 eIF2A Beta-prop_NUP159_NUP214 WDR54 Beta-prop_NWD2_C Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_NOL10_N Beta-prop_DCAF12 Beta-prop_BBS7 DUF6923
Other DBs
NCBI-GeneID: 125969107
NCBI-ProteinID: XP_049576785
LinkDB
Position
5:4340621..4349584
AA seq 620 aa
MDLEPKIFPELELAAVSGFNGQVHFGMRLHPDKEYLIYPLGCTVVLTHIKDDKRHFLHGH
TSDVSCVSMSKSGVYIASGQINYNDFEADIIVWDYAKRSLYTRFLIHESKVEALAFSPND
KYLVSLGGQDDGRILLWNLATKQAISSAPALPLSLCHRLVIKYSNTNDNIFVSAGRATLQ
LWEMDETNKIKPTVCELRKLKRTVKCIEFAPDDEFFFCGTSSGDILKINTKTKYLSDYGP
VKTKHSLGVTVLKALSTGELLVGSGFGTLTLCSTTTLKALRHVQMNNGVTSIALKDDGQQ
FFVGTDASEIYCLHLQDFKAELVSTNHHGAVKDVSIAFGSSELFATASEEDIRVWHIDKS
KALLRIPEPCLTCNTVHLMIDGHSIITGWNDGKIRIFAPQSGRLMLVIHNAHRNGVSALK
GSRDCKKIVSGGQDGTVCVWELLKHGQRRLAFLTEHKATVRCVQIRSDDKESVTASMDGT
CIIWDIVKFVRIRKIITKNSSFKTVCYHPEEHQIVTSGTDRRIVYWDVHDGSAIRELQDR
ETSAINCMHISYDGRYFVTGGVDKLVRVWDYMDGTVTHVGKAHGGTITSVEVCCNNSTLI
STSADGAVMRWKFPHPLLSD
NT seq 1863 nt   +upstreamnt  +downstreamnt
atggatctggaaccaaaaatctttcctgaacttgaactggcggcggtttccggcttcaac
ggacaagtgcatttcggcatgaggcttcatcccgataaagagtatctcatctatcctctg
ggatgcaccgtcgttctcacacacattaaagacgacaagagacacttcctgcacggtcac
accagtgacgtatcctgcgtctccatgtccaaaagtggagtctacatagcttctggacaa
atcaattacaatgactttgaggccgatataatcgtgtgggactacgccaagcgaagcttg
tacactcgctttttgatccatgaatccaaggtggaagcgttggctttctctcctaatgac
aagtatctggtgtccctcggaggccaagacgatggaagaatacttttatggaacctcgcg
accaagcaggccattagttcggctccagcgcttcctttgagtttatgtcaccgcctcgtc
atcaagtactctaacaccaatgacaacatttttgtctctgctggcagggcaaccttgcag
ctttgggagatggatgaaaccaacaagattaaacctacagtctgtgaactgcgtaaactg
aagaggacagtgaagtgcattgagttcgcaccggacgatgagttttttttttgtggtact
tccagtggagacatcttgaaaattaacaccaagacaaagtatctaagcgactatggtccc
gttaaaaccaaacacagcctgggagtcactgtcctaaaggcgttaagtacgggtgaactc
cttgtcggttctggatttggcaccttgacactttgctccacgaccaccttgaaggctctc
agacacgtgcagatgaacaatggagtgacctccatcgctctcaaagatgacggccaacag
ttttttgtcggcacagacgcgtccgagatctactgcctccatctgcaggatttcaaagct
gaactcgtgtccacgaatcatcatggcgccgtcaaggatgtctcaattgcttttggctcc
tctgagttatttgccaccgcctcagaggaggacatcagggtgtggcacatagacaagtcc
aaagcgctgctgagaatcccagaaccttgccttacctgtaacactgtgcacctgatgatt
gacggacacagcatcatcactggatggaacgacgggaagatccgcatattcgccccgcag
agtggccgcctcatgctcgtcattcacaacgcgcaccgaaacggcgtgtcagccctcaag
gggtccagggactgcaaaaaaattgtcagcggggggcaggatggaacggtttgcgtttgg
gagctgctgaagcacggccaacgacggcttgccttcttgacggaacacaaagccactgtg
aggtgtgtccagatcaggagcgacgacaaggaatctgtcacagctagcatggatggaacc
tgcatcatctgggacattgtgaaatttgtgcggattcgcaagataattaccaaaaattcc
tcgttcaagaccgtgtgctaccatcctgaagagcaccagattgtcaccagcggcaccgac
agaaggattgtctactgggacgtgcacgacgggtcagcaatcagagagcttcaggacagg
gagacgtcagccatcaactgcatgcacatctcttatgacggcagatactttgtgacaggt
ggtgttgacaagctggtgagggtatgggactacatggacggtacggtcacccacgtcgga
aaagctcacggaggaacaatcaccagcgtggaggtctgctgtaacaacagtacccttatc
agcaccagcgcggacggagccgtcatgcgctggaaatttcctcatccactcttgagtgac
tga

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