Syngnathus scovelli (Gulf pipefish): 125969108
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Entry
125969108 CDS
T08785
Symbol
septin9b
Name
(RefSeq) septin 9b isoform X1
KO
K16938
septin 3/9/12
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125969108 (septin9b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125969108 (septin9b)
04812 Cytoskeleton proteins [BR:
sscv04812
]
125969108 (septin9b)
04147 Exosome [BR:
sscv04147
]
125969108 (septin9b)
Cilium and associated proteins [BR:
sscv03037
]
Motile cilia and associated proteins
Sperm associated proteins
125969108 (septin9b)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
125969108 (septin9b)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125969108 (septin9b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
RsgA_GTPase
AIG1
Dynamin_N
Roc
GTP_EFTU
AAA_16
AAA_22
Ras
NB-ARC
ABC_tran
URGCP_GTPase
AAA_29
FeoB_N
FtsK_SpoIIIE
IIGP
AAA_24
P-loop_TraG
AAA_7
G-alpha
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
125969108
NCBI-ProteinID:
XP_049576788
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All DBs
Position
5:4404115..4440867
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AA seq
619 aa
AA seq
DB search
MSDLGVNSHLEGIISDFEALKRSFEVEDVDTSAHLSPGSRRTTNVPHRNAMSPTSIYYRD
LGTAPSVTNNNNLNYTQPRSIMGGGGSKTPEPVSRRSELSIDICATPSKQMDATSPASMR
FSTNSALRRPEVLGHSKTPEMSHKREVTFAKTDSPGTRRNEGSGHANGTGRAPEQSHTRK
FEPPSPGDIRKPEISITRAPAENNGHHPAVHHPHHPNPHHNTIVTTFRCSSPNHAGRKSP
NPDRSEVSLGHSNMSDYTKPHHANPPHGKGDKTHHGGGGDFSYVGIDAILEQMRRKAMKQ
GFELNIMVVGQSGLGKSTLMNTLFKSKVSRKSVEPDAGDRIPKTVEIKSISHDIEEKGVR
MKLTVIDTPGFGDQINNENCWQPIMKFINDQYEAYLQEEINIDRKKRIPDSRVHCCIYFI
PPTGHCLRPLDVEFMKRLSKVVNIVPVIAKADTLTLEERDYFKQTIREGLRANDIDVYPQ
KEFDEDAEDRMINDKIREMIPFAVVGSDQEYQENGKRILGRRTKWGTIEVENIAHCEFAY
LRDLLIRTHMQNIKDITGSIHYETYRVRRLNESNSHLSAHPSERPPAQLKANGQAEPLPG
SGVQVNGAAIQHQVLTHEM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttaggagtcaattcacacctggaggggatcatttcagattttgaagctctg
aagaggtcctttgaggtggaggacgttgacacttcagctcacttgtctcccggttccaga
cgcacaaccaacgtccctcaccgtaacgccatgtctcccaccagcatctactaccgcgac
ctgggcaccgccccatcggttacaaacaacaacaacctcaactacacccagcctcgttcc
atcatgggcggaggaggctccaagactccggagccagtatcacgccgctccgagctgtcc
atcgatatctgcgccacacccagcaagcagatggacgccacaagccccgcatctatgcgc
ttttcaaccaacagcgccctcaggcgccccgaggtcctcggccactccaagacgccggaa
atgagccacaagcgggaagtcacttttgccaagacggattccccggggacacggcgtaac
gagggcagcggtcacgctaacggcaccggccgtgccccggaacaaagtcatacccgcaag
tttgagcctcccagtcccggggacattcgtaaacctgaaatcagcatcaccagagctccg
gcggagaacaacggccatcacccggcagtgcaccacccgcaccatcctaatcctcaccac
aacaccatcgtcaccaccttccgatgctcctcaccgaatcacgccggacggaaatccccc
aaccctgaccggtcagaagtcagtctgggccacagcaacatgtcggactacaccaagcca
caccacgccaacccgccgcacggcaaaggcgacaagactcaccacgggggcggcggcgac
ttcagctacgtcggcatcgacgccatcctcgagcagatgaggaggaaggccatgaagcaa
ggctttgagctcaatatcatggttgtggggcaaagcggcttgggcaagtccactctgatg
aacacgctgttcaaatcgaaggtgagccgcaagtctgttgagcctgacgccggggacagg
attccaaagacggtagagatcaagtccatcagtcacgatatagaggagaaaggtgtgagg
atgaaactgacggtcatcgacacgccaggctttggggatcagatcaacaatgagaattgc
tggcagcccatcatgaagttcatcaatgaccagtacgaagcctacctgcaggaagagatc
aacatcgaccggaagaaaaggattccagactccagggtgcactgctgcatatacttcatc
ccgcccactggccactgtctgaggcctctggatgtggagttcatgaagcgtctcagcaag
gtggtgaacatcgtgcccgtcatcgccaaggccgacacgctgacgctggaggagagggac
tacttcaagcagacgataagggaagggctgcgagccaacgacatcgacgtctaccctcag
aaagagtttgacgaggacgcagaggaccggatgattaatgataaaattagggaaatgatc
ccgtttgcagtggtgggcagtgaccaggagtaccaggagaacgggaagaggattctggga
aggagaacaaaatggggcaccatcgaggtcgagaacattgcacactgtgagttcgcttac
ctgcgagaccttctgatcaggacgcacatgcagaacatcaaagacatcacgggcagcatc
cattacgagacgtatcgcgtgcgccgactaaacgagtccaacagtcacttgagcgctcac
ccgtccgagcgtcctcctgctcagctcaaggcgaacggtcaggccgagccgctgccgggc
agcggcgtgcaggtcaacggagcggcgatccaacatcaggtcctcacccatgagatgtag
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