Syngnathus scovelli (Gulf pipefish): 125969109
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Entry
125969109 CDS
T08785
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sscv00536
]
125969109
Glycosaminoglycan binding proteins [BR:
sscv00536
]
Heparan sulfate / Heparin
Axon guidance molecules
125969109
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
125969109
NCBI-ProteinID:
XP_049576796
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Position
5:4293781..4315796
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AA seq
610 aa
AA seq
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MFRTLDAALVVLLAASLRRTSGGYGGGAGSALSSAQSSPPDPCYDEHGTPRRCIPDFVNS
AFGKEVKVSSTCGHRIASRFCMLSAGDKADERSRSCHTCDAADAKRNRPPAYLTDLNNPH
NLTCWQSENFVQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMVISKSMDYGKTWVPFQ
YYSSQCRKMYNKANRAAITKQNEQEAICTDSHTDMFPLSGGLIAFSTLDGRPSAHDFDNS
PVLQDWVTATDIRVTFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCV
KDREGEMVCECKHNAAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNME
LYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRKACKACDCHPVGAAGKT
CNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVTPPTTPASSTEEPSDCDSY
CKASKGKLKINMKKYCKKDYAVQVHILKADKAGEWWKFTVNVISVYKQGESRIRRGDQFL
WVRAKDVACKCPKIKPGKKYLLLGNDEDSPGQSGGVVADKGSLVIQWRDTWARRLRKFQQ
REKKGKCKKP
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaactctggacgctgcgctcgtcgtgttgctggccgcctctctgcggcgcacg
tcgggcggctacggcggcggcgcgggctcagctctctcctcggctcagagctcgccgccg
gacccgtgctacgacgagcacggcaccccgcgtcgttgcatcccggactttgtcaactcg
gcgttcggcaaggaggtgaaggtgtccagcacctgcggccaccggatcgcgagccgcttc
tgcatgctcagcgcgggggacaaggcggacgagaggagccgcagctgccacacgtgcgac
gcggccgacgccaagcggaaccggcccccggcctacctcaccgacctcaacaacccgcac
aacctgacgtgctggcagtcggagaacttcgtccagtacccacagaacgtcacgctcacg
ctctccctgggcaagaagtttgaggtgacctatgtcagcctccagttctgctcgccgaga
cccgagtccatggtgatctccaagtccatggactacggcaagacctgggtgcccttccag
tactactcgagccagtgccggaagatgtacaacaaggccaaccgggccgctatcaccaag
cagaacgagcaggaagccatctgcactgactcgcacacggacatgttcccgctgagcgga
ggtctgatcgcattcagtacgctggacgggagaccctcggcccacgactttgacaactcg
cccgtgctgcaggattgggtgacggccaccgacatccgcgtcacttttagccgactgcac
accttcggcgacgagaacgaggacgactcggagctggcgcgggactcgtacttctatgcc
gtgtccgacctgcaggtgggcggccgctgcaagtgcaatggacacgcgtcgcgctgcgtc
aaggaccgcgagggcgagatggtgtgcgagtgcaagcacaacgcggccggaccggagtgt
gacaggtgcaagcccttccactacgaccggccgtggcagagggcaaccgcacgggaagcc
aacgagtgcgtggcctgtaactgcaacctgcacgcccgccgctgccgcttcaacatggag
ctgtacaagctgtcggggaggaagagcggaggcgtgtgcctcaactgccgccacaacacg
gccggacgccattgccactattgcaaggagggctactaccgggacatgtccaaacctatc
tcgcacaggaaagcctgcaaggcatgcgattgccatcccgtgggtgcggccggcaaaacc
tgtaaccaaaccacaggacaatgtccctgtaaagacggcgtgaccggtatcacgtgcaac
cgctgcgctaaaggttaccagcagagccgctcgcccattgccccgtgcataaagattcca
gttacaccgcctacgacaccagccagcagtacagaagagccctcagactgtgactcttac
tgcaaagcatcaaaaggcaaactgaaaatcaacatgaagaagtattgcaagaaggattac
gctgtccaggtccacattctgaaggcggacaaggccggcgagtggtggaaattcaccgtc
aacgtcatttccgtctacaagcaaggggagagtcggattcgtcgcggggaccagttcctg
tgggtccgcgccaaagacgtggcctgcaagtgtcccaagatcaagcccggcaagaaatat
ctgctgctgggcaacgacgaggactcccccggccagagcggcggcgtggtggcggacaaa
ggcagcctggttatccagtggagggacacgtgggcacgcaggctgcggaagttccaacag
cgggagaagaaaggaaagtgcaagaagccgtaa
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