Syngnathus scovelli (Gulf pipefish): 125969214
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Entry
125969214 CDS
T08785
Symbol
si:zfos-323e3.4
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125969214 (si:zfos-323e3.4)
Ion channels [BR:
sscv04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
125969214 (si:zfos-323e3.4)
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_5
LRR_R13L1-DRL21
LRR_At5g56370
LRR_6
LRR_EndoS
LRR_9
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
125969214
NCBI-ProteinID:
XP_049577023
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Position
5:4926145..4932110
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AA seq
810 aa
AA seq
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MIPVGEFRNIGIEQNSKYRVLKPWWDVFSEYLCVAMLMIGVFGCTLQLTQDKIACLPSPF
TSPTPSAIDCSYIRNYGENQTWESLNLKPSHPVVREVLGRKNNLDIHQYVFINHYCYERF
VHWYAKYFPYLVVIHTMIFMVTSSFWFKFPGTSSKLDLFVTILGKCFDSPWTTRALSEVS
EERGEEKLVNWRRSTISKDPTEKRTDEEETALLQRSASCKSNPDKKTQESQSAPSVLDKK
EGEQAKALFEKVKKFRTHVEEADILYIMYVLQTSLKVFKFLLIIIYTAALSPNIEIVVRC
LVPPELTGFDIYCCNHNKAHLFSKLAYCYICFVAVYGILCIYTLYWQFHRPLKIYSYEHV
RLETGINDIPDVKNDFAFLLHLVDQYDDLYAKRFAFFLSEVSESRLHQLNLNYEWTAKKL
RARLVKNASDRQELHLVLLPGLPDTVYELPEIESLKLEQVKNVSISPNVAKLENLRDLSL
IYCKAKVQLPALNHLKDHLKFLRLCFESLDEVPEWMYHLQRLEELHLNGPLTNEVARSAN
LDSLRELTALRVLTLRSNLTKIPTSISDVAQQLQRLSIYNEGTKIQGFSSLKKLSNLVSL
ELVGCELERIPSAVFSLSNLQELDLKENKLTTVEEILSLQHCQRLVTLRLWHNKITYIPD
HISKLLTLETLDISWNKLRKLSPRLFYCTKLRHLDVSHNQLTAIPPEVGILQGLQFFSAA
FNSLETLPDELFSCKRIKTLNVGNNCLFYLSPRVANLAHLIRLELKGNRLDGLPAEVTDC
PLLTTSGLVVEENLLELWPSQVRTRLLSSS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgataccagtgggagaattccgaaacatcggcatcgagcagaactccaagtaccgtgtg
ctcaagccgtggtgggacgttttctccgagtacctgtgtgtggccatgctcatgattgga
gtctttggatgcaccttacagctcacccaagacaagattgcttgcctgccgagtccattc
accagtccaacgccaagcgccatcgactgcagctacatccgcaactacggcgagaaccag
acgtgggaaagcctcaatttaaaaccgagccatcccgtcgtacgggaggtgctcggccgc
aagaataacctggacatccaccagtatgtcttcatcaaccactactgctacgagcgcttt
gtgcactggtatgcaaagtacttcccgtatctggtggtgatccacaccatgatcttcatg
gtgaccagcagcttttggttcaagttccctggaacatcctccaaacttgacctttttgtc
accatcctgggaaaatgctttgactccccctggaccaccagagccttgagtgaggtttct
gaggaaagaggtgaagaaaaattggtcaactggaggagaagcaccatatccaaagatccc
acggagaagcgaaccgacgaggaggagaccgccttacttcagcgatccgcttcgtgtaaa
tccaatccagataagaagacacaagaatctcagtcggctccgtctgtgttggataagaag
gaaggagagcaggctaaggctctgtttgagaaggtgaaaaagttcagaactcacgtcgag
gaggcggatatcttgtacattatgtacgtgctgcaaacgtccctcaaggtctttaagttc
cttttaattatcatttacactgcggcactttctccaaacattgagatcgtggtgcgctgc
ttggttcctcccgagctgaccggttttgacatctattgctgtaaccacaacaaggctcat
ctcttctccaaactggcctactgctacatttgcttcgtggccgtctacgggattttgtgc
atctatactttgtattggcagttccaccgtcctttgaagatctactcctatgagcacgtc
agactagagacgggcatcaacgacataccggacgtgaagaacgatttcgccttcttgctc
cacctggtggaccaatacgacgacctctacgcgaaacgattcgctttctttctctccgag
gtgagcgaaagtcgactccatcagctcaacttaaactacgaatggaccgccaaaaagctg
cgcgcccgtctggttaagaatgccagcgaccgacaggagctccacctggttctgttgccg
ggacttcccgacacggtctacgagttgcccgagatcgagtcgctgaaattggagcaggtt
aaaaatgtctccatctcgcctaacgtggctaagctggagaatcttcgggatctgtcgctt
atctactgcaaggccaaggtccagctgcccgccttaaaccatctcaaagaccacttaaag
ttcctgcgcctgtgctttgaaagtctcgatgaggtgcccgaatggatgtaccacctgcag
cgactggaggaactgcatctgaacggcccgcttaccaacgaggtggcccgaagtgccaac
ctggactcccttcgagagctcacggcactgcgggtcctcaccctgcgctctaacctcaca
aagatccccaccagcatctccgacgtcgcacagcagctacagcgtttgagcatctacaac
gaaggcaccaagatccaaggcttcagcagcctgaagaagctaagcaacctggtctcgctg
gagttagtgggctgtgagttggagcgcatcccgagcgctgtcttcagcttgagcaatctg
caggagttggacctgaaggaaaacaagctgaccaccgtggaagagatcctgagcctgcaa
cactgccagcggttggtgaccctgcgcctgtggcacaacaaaatcacctacatccccgat
cacatcagcaagctgcttacgctggagactctggacatcagctggaataagctacgaaag
ctttccccgcgattgttctactgcaccaagctgaggcacttggacgtctcgcacaaccag
ctcaccgccatcccgcccgaggtgggcatcctgcagggtctccagttcttctccgctgct
ttcaactccttagaaaccctcccagatgaactgttctcctgtaaaagaataaagactttg
aatgtgggaaacaactgcttgttctaccttagccccagagtagccaacctggcccacctc
atccgactggagctcaaagggaaccgcctggatggtttacctgcggaggtaacggactgt
cccctgttgaccaccagtgggcttgtagtggaagaaaatcttctcgagttgtggccgtca
caagtgcgcacaaggttgttgagtagtagttga
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