Syngnathus scovelli (Gulf pipefish): 125969262
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Entry
125969262 CDS
T08785
Symbol
hmx1
Name
(RefSeq) homeobox protein HMX1
KO
K09349
homeobox protein Nkx-5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125969262 (hmx1)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
125969262 (hmx1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
125969262
NCBI-ProteinID:
XP_049577107
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Position
5:9524745..9526352
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AA seq
270 aa
AA seq
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MQKKLMDTHTPLLSSPRASSFFIENLLASGPHERDSPSESSRYGAAARSDTASPVSRRGV
ISAEPLVNWYPRALTTPCSPSVNTRSEDHCCSVSTSDRSSPAVSEPITDDSYESDRKLGD
GNLIDIHDEAQSGFDAPPDSNTTRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAA
SLHLTETQVKIWFQNRRNKWKRQLAADLETVHIPNPSQRVIRVPILYHDGPPAMAFNLNG
HQVFSNSIAYPLSSLAHSMSILRSQMSGLV
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaagctgatggacacccacacgcctctattgtcatcaccgagggcgtcgtct
tttttcattgagaatctactggcgtcggggccacacgagcgggattctccttccgaaagc
agccgatatggagctgcggcgcgctcggacactgccagcccggtctcgcggcgcggcgtc
ataagcgcggagccgctggtaaactggtacccaagagctttgactaccccgtgcagtcca
tctgttaacacgaggtccgaggaccactgctgctcggtgtcgaccagtgacagaagttct
cccgccgtctcagaaccgattacagacgacagctacgagtcggacaggaaattaggggac
ggcaacctgattgatatccacgacgaagctcagagtggttttgatgcaccccctgactcg
aacaccaccaggaagaagaaaacccgaactgtgttcagccgaagccaagtgtttcaactg
gagtccacctttgacatgaaacggtacctgagcagctcggagagggccggcctggccgca
tcactccacctgacagagacccaagtcaagatctggttccagaaccgcaggaataaatgg
aagagacagctggcggcggatctcgagactgtacacattcccaacccgagccagagggtg
ataagagtccccattttgtatcatgacggacctcctgcaatggcttttaatttgaacgga
catcaggtcttctcgaactctatcgcgtatcccctgtcctccctggcccactccatgagc
atactgaggtcgcagatgagcggcttggtgtaa
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