Syngnathus scovelli (Gulf pipefish): 125969279
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Entry
125969279 CDS
T08785
Symbol
acsl1a
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1a isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00061
Fatty acid biosynthesis
sscv00071
Fatty acid degradation
sscv01100
Metabolic pathways
sscv01212
Fatty acid metabolism
sscv03320
PPAR signaling pathway
sscv04146
Peroxisome
sscv04216
Ferroptosis
sscv04920
Adipocytokine signaling pathway
Module
sscv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125969279 (acsl1a)
00071 Fatty acid degradation
125969279 (acsl1a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125969279 (acsl1a)
09143 Cell growth and death
04216 Ferroptosis
125969279 (acsl1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
125969279 (acsl1a)
03320 PPAR signaling pathway
125969279 (acsl1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sscv01004
]
125969279 (acsl1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125969279 (acsl1a)
Enzymes [BR:
sscv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125969279 (acsl1a)
Lipid biosynthesis proteins [BR:
sscv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125969279 (acsl1a)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of breast milk
125969279 (acsl1a)
Exosomal proteins of breast cancer cells
125969279 (acsl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
125969279
NCBI-ProteinID:
XP_049577133
LinkDB
All DBs
Position
5:complement(3940730..3949426)
Genome browser
AA seq
697 aa
AA seq
DB search
MQAQEVLRQLRLPELDDLRQYIRGLPTNTLLGMGAVATLTTYWLCTRPRALLPPCDLTMQ
SVNMQSEENARRSVLNNSDEHMAYYHSDAKTMYEGFLRGLRVSNNGPCLGARKPNQPYEW
QSYREVADRAENVGSALLHKGHSQSGDKFIGIFAQNRPEWTISELACYTYSLVAVPLYDT
LGAEAISFVIDKATISTVICDVTEKARMILDCFNEKKRTVKTIVVIEPFDAELVARGQTF
GVEVMSLKDFEDLGKTYHHDPMPPKPDDLALICFTSGTTGNPKGAILTHGNVIANTAAFL
KITEGKIQASSKDVHISFLPLAHMLERVVQGVILTQGARIGFFQGDIRLLMDDLKELRPT
FFPVVPRLLNRMFDKIFSQANTRLKRWMLDLAFQRKLSELNSGVVRRDSIWDKLIFKKVQ
ASLGGRVRLMLTGAAPVSPPVLTFLRVALGCQFYEGYGQTECTAGCSMSLPGDWTAGHVG
PPLPCNGIKLVDVEDMNYFAANNEGEVCVKGPNVFLGYLGDPEKTAEAIDKDGWLHTGDV
GKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYNRSDPVAQIFVHGDSLQACLVAIV
VPDPDFLPIWIKKRGITGSYLELCKNNDVKNAILEDIQRLGKEAGLKSFEQVRDIALHSE
MFSVQNGLLTPTLKAKRADIRNHFRVQIDELYAGLKV
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctcaggaggtcctgagacagttgcggcttccagagctggatgacctgcgccag
tacatacgtggacttcccaccaacacgcttctgggcatgggcgccgtggccaccttaacc
acctactggctctgcaccagaccacgagccctcctgccgccatgcgacctcaccatgcag
tcggtaaacatgcagagtgaggaaaacgcgagaagatcggtgctcaacaacagcgacgaa
cacatggcgtactaccacagcgacgcaaagacgatgtacgagggctttctacgagggctt
cgagtgtcaaataacggaccgtgtttaggagcgagaaaaccaaaccagccgtacgagtgg
cagtcgtacagagaggttgcagaccgggccgagaacgtgggctccgctttgcttcacaag
ggtcactctcagtccggagacaaatttattgggatctttgcacagaacagaccagagtgg
accatttccgagctggcttgttacacgtactccctcgtagccgtcccgctgtacgacacg
ctgggggcagaggccatcagctttgtcatcgataaagccaccatcagcacggtgatctgc
gacgtgaccgaaaaagctcggatgatcctcgactgtttcaacgaaaaaaagcgaacggtg
aagacgattgtggtgatagagccgtttgacgccgagctggtggcccgaggacaaacgttc
ggagtcgaggttatgagcctgaaggactttgaggacttgggtaaaacttaccaccatgac
cccatgccaccgaaaccagacgaccttgcgcttatctgcttcacatctggaactacaggc
aacccaaagggtgcaattctcacccatggaaatgtcatcgcaaacactgcagcttttctt
aaaataactgagggcaaaatccaggcctcttccaaagatgtgcacatctccttcctccct
ttggcccatatgttagagagagttgtgcagggcgtcatcctcacccaaggcgctcgtatc
ggattcttccaaggtgacattcgacttttgatggacgacctgaaagaactgcggccgacg
ttcttccctgtggtgccacgtctcctaaaccgcatgtttgataagatatttagccaagcc
aacacgcggctaaaaagatggatgcttgatttggcattccaaaggaagctttcggagctg
aatagcggcgtggtcaggagggacagtatctgggataagcttatcttcaaaaaagtacag
gcgagcttgggtggacgcgtgaggctgatgcttacaggagcggcgcccgtgtcgcccccc
gtgctcactttcctaagagttgcattgggatgtcagttttacgaaggctacggtcagaca
gaatgcacagcaggatgctccatgtcgttgcctggtgactggacagctggtcacgtcggg
cctcctctgccctgcaatggcatcaaattggtcgatgtggaagacatgaattactttgca
gccaacaacgaaggagaggtttgtgtcaaaggaccaaatgtcttcctgggatacctggga
gaccccgagaaaacggccgaggccatcgataaagacggttggctgcacacgggggacgtt
ggcaaatggcttccaaacggcactctgaagatcatcgacaggaagaagcacatcttcaag
ctggctcaaggagaatacatcgccccggagaaaatcgagaacatttacaaccgcagcgac
ccggtggcacagatattcgtgcacggtgacagcttacaggcatgcttggtggcgatcgtg
gtgcccgatcctgactttttacccatttggatcaagaaacgaggcattactggctcttac
ttggagttgtgcaagaacaatgatgttaagaatgccattttggaggacattcagaggctg
ggcaaagaagctggactcaagtcttttgaacaggtgagagacattgcattacattcggag
atgttctctgtgcaaaacggcctgctgacaccaacactcaaggctaaaagagcagatatt
cggaatcacttcagagtgcagatagatgaactttatgcgggccttaaggtctaa
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