Syngnathus scovelli (Gulf pipefish): 125969296
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Entry
125969296 CDS
T08785
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
125969296 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sscv03051
]
125969296 (psmd1)
Proteasome [BR:
sscv03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
125969296 (psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Zip
Cnd1
PA26
Motif
Other DBs
NCBI-GeneID:
125969296
NCBI-ProteinID:
XP_049577154
LinkDB
All DBs
Position
10:7989166..8008420
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AA seq
968 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKVFALQKLDYLVNDFWAEISGSVDKIEVLYEDETFHNREFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVTDDTEYVETIIAKCIDHYTKLRVENAELPE
DEERKSIDPRLEGIVNKMFLRCLNDHKYKQAIGIALETRRLDMFEKTILESNDVSGLLAY
SLKVCMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE
DNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIPAVPGSTNTGTVSTTEDSEAMETD
DKAGSSPAGKSAETKDEPKDQNAKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV
RNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEAL
QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGALG
LGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGYAQETQ
HEKILRGLAVGIALVMYGRMEEADTLIESLCRDKDPILRRSGMYTVGMAYCGSGNNKAIR
RLLHVAVSDVNDDVRRAAVESIGFILFRTPEQCPSVVSLLSESYNPHVRCGAAMALGICC
AGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEVTCPKVNQFRQLYAKVINDK
HDDVMAKFGAILAQGILDAGGRNVSISLQSRTGHTHMPSVVGLLVFTQFWFWFPLSHFLS
LAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPALEVPKEKEKEKVSAAVLSITAKAK
KKEKEKKEKEEEKMEVEVQEGEKEKEKEKKDEEKEKDKEKEKKKEAEPNFQLLENPARVM
PAQLKVLNMPDTCRYQPFKQLHTGGIIIMKDTSEEEEELVEPVSAHGPKIEEEEQEPEPP
EPFEYIDE
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgataacatctgctgctggaataatttccctccttgatgaggaggaaccacagcttaag
gtgtttgcactgcagaagcttgactaccttgtcaatgacttctgggctgaaatttcagga
tctgttgacaaaattgaggtcttatatgaagatgagacattccacaacagagaatttgct
gctctggtggcctcgaaggtcttttatcatcttggagcatttgaagaatctctgaactac
gcgcttggtgctggggatctcttcaatgtcactgatgacactgaatatgtggaaaccatc
attgccaaatgcatcgatcattacaccaaattgcgtgtggaaaacgctgaactgccagag
gatgaagagaggaaaagtatcgaccctcgccttgagggcattgtcaacaagatgttcctg
cgatgcctaaatgaccataagtacaagcaggccatcggaattgccttggaaactcggcgc
cttgacatgtttgagaagaccatcttagaatcaaatgatgtcagtgggcttcttgcttac
agtctgaaggtgtgcatgtcccttatgcaaaacaagaagttccgtaatgaggtactgcga
gttctggttaagctctatatgaacctggagaagcctgattttatcaacgtctgtcagtgc
ctgatattcctggatgatcctcaagctgtcagcgacatcttggaaaagttggtgaaggaa
gataatctgctgatggcctatcagatctgctttgacttgtacgagagtgccagccagcag
tttctctcctctgtcatccaaaaccttcgaacagttggaacaccaatcccagcagttcct
ggttccactaatacaggcactgtgtccactacagaagacagcgaggcaatggagacagat
gacaaagctggcagctcccctgcaggaaagtcagcagaaacgaaggacgagcccaaagac
cagaacgccaagatgatcaaaatcctcagcggggagatggccatcgagttgcacttgcag
ttcctaattcgaaacaacaacactgatcttatgatcctcaaaaacactaaggatgcggtc
cgaaattcagtgtgccacacggccacggtcatagccaactctttcatgcacactgggacc
acaagtgaccagttcctcagagaaaaccttgaatggcttgccagagccaccaactgggca
aaattcacagcaacagcaagcctcggtgtcattcacaagggtcatgaaaaagaggccctt
cagttaatggccacgtacttgccaaaggacacttcccctggctctgcctaccaggaggga
ggaggtctctacgctttgggcctcatccatgccaatcacggcggagacatcatcgattac
ctgctcagtcagctcaaaaatgccagcaatgatattgttcgtcacggcggtgctcttggt
ctcggtctggctgccttgggaacagcgagacaggatgtgtatgacctcctcaagtccaat
ctgtatcaggatgatgctgtcactggtgaggctgcgggcctagccttgggtcttgtcatg
ctgggctccaagtccgctcaggccattgaggacatggtgggctacgcacaggagacccaa
cacgagaaaatcttgcgtggtctggcggtgggaatcgctttggtcatgtacggacgcatg
gaggaggctgataccctcattgagagtctttgcagagacaaggaccccattctgcggagg
tctggtatgtacaccgtaggcatggcctactgcggctctgggaacaacaaggccatccga
cgcctgctacatgtcgctgtgagtgacgtaaacgatgatgtcaggagggcagctgtcgag
tccattggtttcatcttgttcagaactcctgagcagtgtcccagtgttgtgtcccttttg
tcagagagctacaacccccacgttcgctgtggtgctgccatggctttgggcatctgctgt
gctggaacgggcaacaaggaggccatcaatctgttggagcccatgaccaatgacccagtg
aactacgtaagacagggtgccctcattgcctctgcactcatcatgatccagcaaacggaa
gtcacctgccccaaggtgaatcaattcagacaactttatgcaaaggtaatcaatgacaag
catgatgacgtcatggccaaattcggtgccatcctggcccagggaattctcgatgcaggt
ggacgaaatgtgagcatctcgcttcaatccaggactggtcacacacacatgccgtcagta
gtgggcctgctcgtcttcacgcagttctggttctggttccccctctcccacttcctgtcc
ttggccttcacacccaccgccatcatcggccttaataaagatctcaagatgcccaaggtg
cagtatcgctccaactgtaaaccttccaccttcgcctacccgccagctctggaggttccc
aaggagaaggagaaggagaaggtctctgctgctgttctctccataacagctaaagcaaag
aagaaggagaaggaaaagaaagagaaggaggaggagaaaatggaagtggaagtacaggag
ggcgagaaggagaaggagaaagagaagaaggatgaggagaaagagaaagacaaggagaag
gagaagaagaaggaggcggagcccaacttccagctgctggagaacccagccagggtgatg
ccagcccagctcaaagtgctcaacatgcctgacacgtgccgctaccagcccttcaaacag
ctacacacaggtggcatcatcatcatgaaggacactagcgaggaagaggaggagctcgtg
gagcccgtctcagctcatggccccaaaatcgaggaggaggagcaagagccggaaccaccc
gagccctttgagtacattgacgagtag
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