Syngnathus scovelli (Gulf pipefish): 125969317
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Entry
125969317 CDS
T08785
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
125969317 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125969317 (cnga1a)
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125969317 (cnga1a)
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
125969317
NCBI-ProteinID:
XP_049577172
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Position
5:complement(7220242..7225408)
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AA seq
616 aa
AA seq
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MIVPQSLPNCLLNMNNSNNNAEKKEKQEQGPNEKEKEKDVDKPKEIFVINPAGNIYYNWL
FIVTLPVMYNWTMIIARACFEELQHNYILYWVLLDYTSDLIYLADMLVRTRTGYLEQGLM
IKDEKLLRDRYVDSFQFRLDVISMLPTDVLYFYLGLDYPEIRVNKLLRIGRMMEFFTKTE
TKTNYPNIFRISNLIMYILIIIHWNACFYFSFSKSIGFGSDEWVYPALDDPDEPAFGQPM
RKYAFSLYWSTLTLTTIGETPPPALDSEFIFHVVDFLVGVLIFATIVGNIATMISNMNAA
QAQFQARIDNIKQYMQVRKVSKELELRVIKWFDYLWNNGKAQDEREVLRYLPDKLKAEIA
IQVHMDTLKKVRIFADCEAGLLIELVLKLRPQVFSPGDYICKKGDIGREMYIIKDGKLAV
VADDGVTQFVVLGSGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMESLV
EYPDAKGMLEEKGRQILMKDGLIDLDPANIKPEAKELEEKVNRLYGTMDVMQMRLKKILE
KYKETDKTLWHRIKDLELLTGEEIEDDDEVEEDVKKEEVQVDEEKTEDKGGVDEVDKEKR
EDEKEEEEKAEAKDEE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaccacagtcattgcctaattgcctgctcaacatgaacaacagtaataataat
gctgaaaagaaggaaaaacaagaacaaggaccaaatgaaaaggaaaaagaaaaggatgta
gacaagcccaaagaaatatttgtcattaaccctgctggaaatatttattacaactggctt
ttcatcgtaacattgccagtcatgtacaactggaccatgattatcgctagggcgtgcttc
gaggagctgcagcacaactacatcctttattgggttttattggactacacctcagacctc
atctatctggctgatatgcttgtcaggacgcgaacaggttaccttgagcaaggcttgatg
atcaaagatgagaagctgctccgcgatcgctacgtcgacagcttccagtttcggctggat
gtcatctccatgttgcccactgatgttctgtatttctatctgggtctggactaccccgag
attcgcgttaataagcttctaaggattggtcgcatgatggaattcttcacaaagacggag
accaaaaccaactaccccaacatcttccgcatttcaaacttgatcatgtacatcctcatc
atcatccactggaacgcctgcttctacttctcattctccaagtcgattggttttgggtca
gatgaatgggtttacccagctcttgatgatccggatgagcctgcgtttggccagcccatg
aggaagtatgccttcagcctctactggtccacattaaccctaaccacaatcggagaaacg
ccaccaccagccctcgattcggaatttatcttccatgtagtggactttttagttggggtt
ctaatctttgccacaattgtgggaaatattgcaaccatgatctctaacatgaatgccgcc
caagcccagtttcaagctcgaattgacaacattaaacaatacatgcaggttcgaaaggtc
agcaaggagctggaattgcgtgtcattaaatggttcgactacctgtggaacaatggcaag
gcacaggatgaacgcgaggtactgcggtatcttccagataagctgaaagctgaaatcgcc
atccaagttcacatggacacactcaagaaagttcgcatatttgcagactgtgaggctggc
ctgctgatcgagctggtgctcaagctccggcctcaggtgttcagccctggcgactacatc
tgcaagaagggcgatattggtcgtgagatgtatattatcaaagacggaaagctcgcagtg
gttgccgatgatggcgttactcagtttgtggtgctgggaagcggtagctattttggtgag
atcagtatccttaatatcaaaggcagcaaagcaggcaacaggcggacagccaacattcgc
agcatcggctactcagacctcttctgtctgtccaaggatgacctcatggagtcgctggtg
gagtacccagatgctaaaggcatgctggaggagaagggccgacagatcctaatgaaagat
ggcctgattgacttagatcccgctaacatcaagccagaggccaaggagctggaagagaaa
gtcaacaggttatacggtaccatggatgtgatgcagatgagactgaagaagattctggag
aaatacaaggaaactgataagactctgtggcatcgcatcaaagacctggagcttctgaca
ggagaagagatagaagatgatgatgaggtagaggaggatgtgaaaaaagaggaagttcaa
gtggacgaggagaaaactgaagataaaggtggagtggatgaagtagacaaagagaaaagg
gaagatgagaaagaagaggaagagaaggccgaagcaaaggatgaggaataa
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