Syngnathus scovelli (Gulf pipefish): 125969329
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Entry
125969329 CDS
T08785
Name
(RefSeq) PDZ and LIM domain protein 3
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125969329
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125969329
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125969329
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125969329
NCBI-ProteinID:
XP_049577217
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All DBs
Position
5:1613875..1618459
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AA seq
309 aa
AA seq
DB search
MAFKVVLNGPAPWGFRLVGGKDFAQPLTISRVTPGSKASVANLCAGDLIVAIEDSSAADM
LHCDAQNKIKQATNQLTLTVERGGAKLWSPLVSGDGKVSPFKVNLEAEPQEYKAIGTAHN
RRAQPFVAAANIDDTRQVVSTTYNTPIGLYSSGNIQDAMEGQMKGIVAPKSESPRTLANI
EDSDVYRMLQKDHEEPGEPRQSGSFKALQEYVESDGTKPIVTRTVKAPTTKPSAPTGNLQ
KLPICDKCGNGIVGTVVKARDMFRHPTCFVCADCDVNLKQKGYFFVEGQLYCETHARARS
RPPPESHDL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcattcaaggtggtcctgaacgggccagccccctggggcttccgtctggtcggtggc
aaagactttgcccagccactcaccatctccagggtcacgcctgggagcaaagcgtccgtg
gccaacctttgcgccggcgacctgatcgtggccattgaggactcatccgccgccgacatg
ctgcactgcgacgctcagaacaaaatcaaacaggcgaccaatcagctcacgctcaccgtg
gaaagaggcggagctaaactgtggtcgccgctggtgtcgggagacggcaaagtcagcccc
tttaaggtcaacctggaagccgaaccgcaggagtacaaggccatcggcacggcgcacaac
cggcgagctcagcccttcgtggcggcggccaacatcgacgacacgcgtcaggtggtcagc
accacctataacacacctattgggctctactcatctgggaacatccaggacgccatggag
ggacagatgaaaggaatcgtcgcgcccaaatccgaaagcccgaggacgttggctaacatc
gaggactcggacgtctatcgcatgctgcagaaggaccatgaggaaccgggagaacctcga
cagtcgggatccttcaaggcgctgcaggaatatgtcgagagcgacggcactaagccgata
gtgaccaggactgttaaggcgcccaccaccaaacccagcgctcccaccggaaacctgcag
aaacttcccatctgcgacaagtgtggaaacggcattgttggtacagtggtgaaggcccgc
gacatgttccgccacccgacttgcttcgtgtgcgccgactgcgacgtcaatctgaagcag
aagggttatttcttcgtggaaggccaactgtactgcgagacccacgcccgggccaggagc
agacccccacccgagagtcacgacttgtag
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