Syngnathus scovelli (Gulf pipefish): 125969333
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Entry
125969333 CDS
T08785
Name
(RefSeq) homeobox protein MSX-2-like
KO
K09341
homeobox protein MSX
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125969333
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
125969333
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Pacs-1
Motif
Other DBs
NCBI-GeneID:
125969333
NCBI-ProteinID:
XP_049577219
LinkDB
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Position
5:8261246..8263167
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AA seq
252 aa
AA seq
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MAPSPRLTMNAAQGSPSQDAQVGHPQEETEDAQPKDMTMEKERSCLPFSVESLISKKSTC
RTSFESTVHAQNPAAHYSPRTFYAEGSPANCSGSTEDTLHSADSDQSTWFQGNSRSSSPS
QCTLRKHKNNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQN
RRAKAKRLQEAELEKFKLASKPVLSAFALPFPLSAHMQGSATWAPSNPYPRPNLPVPGLF
GGPVTYGMYYLS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcgcctcgcctgacgatgaacgcagcgcagggctcgccgtcccaggacgcg
caagttggccatcctcaggaggagacggaggacgcgcagcccaaggacatgaccatggag
aaggagaggagctgccttccgttcagcgtcgagtctttgatttccaagaagagcacctgt
aggacttctttcgagtcgaccgtgcatgctcagaaccccgcggcgcactactctccgagg
actttttatgcggagggctcgccggctaattgcagcggctccacggaggacacgctgcac
tcggctgacagcgaccagagcacttggttccaggggaactctcggagctccagtccatcc
cagtgtactttacggaagcacaaaaacaaccgtaaacctcgcacgcccttcactacctct
cagctgctggccctggagcgcaagttccgccagaagcagtacctctctatagccgagaga
gccgagttctccagctcactcaacctgaccgagacccaggtgaagatctggttccagaac
cgcagggccaaagccaagaggttacaggaagccgagttagagaagtttaagctggcctcc
aagcccgtcctgtccgcctttgcactgccttttcccctcagcgcgcacatgcagggctca
gcgacttgggccccctcgaacccctatcctaggccgaatctgccggtgccggggctcttt
ggtggacctgtcacgtacgggatgtactatttgtcttag
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