Syngnathus scovelli (Gulf pipefish): 125969343
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Entry
125969343 CDS
T08785
Symbol
lbx1b
Name
(RefSeq) transcription factor LBX1b
KO
K09353
homeobox protein LBX
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125969343 (lbx1b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
125969343 (lbx1b)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
125969343
NCBI-ProteinID:
XP_049577228
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Position
5:10441689..10444271
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AA seq
270 aa
AA seq
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MTSKEVAKCDAGENRRRSPLDHLPPPANSNKPLTPFSIEDILNKPSVKRSYTICGTAHLI
SSSEKHRASSLPLASRALLTQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTLFGQRT
TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL
KRDLEEMKADVESAKAIGQVPLDKLAKLADLEKCANGTLGHPRVDSPTRGGQQEHDLGQK
VTRSPLSPFSDHTTSKECSEDEDVEIDVDD
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaaagaagtggccaaatgtgatgcgggggaaaacaggaggcgaagcccgttg
gaccacttgccaccccccgccaactccaataagccgctgacccccttcagcatcgaggac
atcctcaacaagccgtccgtgaagcgaagttacaccatttgtggtacggctcatctcatc
tcgtccagcgagaagcaccgcgcctccagcctgcctctggccagccgtgcgctgctcacc
caaacctcgccgctgtgcgccctggaggagctggccagcaaaaccttcaaggggctggaa
gtcagcgtgctacaggcggcagaaggccgggacggcatgaccctattcggccagagaacc
acgccgaagaagcgccggaagtcccgcacggccttcaccaaccatcaaatctacgagctg
gagaagcgctttctgtaccagaaatacttgtccccggccgaccgggaccagatcgcccaa
cagctcggcctgaccaacgcgcaagtcatcacgtggtttcagaaccgcagagccaagcta
aaacgggacctggaggagatgaaagcggacgtggagtcggctaaggccatcggccaagtc
cccttggacaagctggccaagctggccgacctggagaaatgcgccaacggcacgctgggc
catccgcgagtcgactcccccacgcggggaggccagcaagagcacgatctcggccagaaa
gtgacgaggtccccgctgtcgcctttctcagaccacacaacgagcaaagagtgctcggag
gacgaggacgtggagattgacgtggatgactga
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