Syngnathus scovelli (Gulf pipefish): 125969376
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Entry
125969376 CDS
T08785
Symbol
fbn2b
Name
(RefSeq) fibrillin-2b isoform X1
KO
K23342
fibrillin 2/3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125969376 (fbn2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sscv00536
]
125969376 (fbn2b)
Glycosaminoglycan binding proteins [BR:
sscv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125969376 (fbn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
FXa_inhibition
hEGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
125969376
NCBI-ProteinID:
XP_049577285
LinkDB
All DBs
Position
10:6648183..6689054
Genome browser
AA seq
2901 aa
AA seq
DB search
MGSGKLAQVLLGWVALCLAPVQVAYGQTANGNGPVQASRFTATTDQREAQRVRRRGQETL
RGPNVCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCSNGQLSSSCGA
GGGVQSCNVRCMNGGSCAEDSCSCPKGFTGNHCGQPVCENGCQNGGRCIGPNRCACVYGF
TGPGCERDYRTGPCFTQVKNQLCQGQLSGIVCTKTLCCATIGRAWGHPCEQCPAQPHPCR
RGFIPNIRTGACQDVDECQAIPGLCAGGNCINTVGSYECKCPAGHRQSEKSHKCEDIDEC
STIPGVCDGGECTNTAGSYVCTCPRGYMSSTDGSRCVDQRAGTCFSALANGRCAAELNGQ
YTKMQCCCDTGRCWALGQIPEMCPVRGSDEFRRLCIVGIPQGHGLPNGYPNGYFPNNNGY
GPKFPSIPNGNGGNGGGAFGGNGGSFGGNGGGFGGNGGGFGGNGGSFGGNGGGLMTHHQI
GTVTVNDTTDICKHFTNLCLNGRCIPKPPSYRCECNMGYKQDVRGECIDVDECVSNPCIN
GDCVNTPGSYHCKCHDGFQGTPTKQACIDIDECIVNGVKCRNGRCVNTEGSFQCICNAGF
ELTPDGKNCIDHDECATTNMCLNGMCINEDGSFKCICKPGFALAPNGRYCTDIDECLTPG
ICMNGRCINSEGSFRCECPPGLAIDVDGRVCVDTHMRTTCYGAIKMGTCSRPFPGAVTKS
ECCCANAEHGFGEPCNPCPSRNSAEFQAVCSSGIGITADGRDINECALDPDICQNGICEN
LRGSYRCICNIGYESDTSGKNCVDINECLVNRQLCDNGLCRNTPGSYTCSCPKGFVFKPD
SETCEDINECESSPCVNGVCRNVIGSFNCECTHGSKLDSTNTICVDSMKSTCWLTIQDNR
CEVNINGATLKSECCSTLGAAWGSPCEPCEIDTACSRGFARMKGLVCEDINECEVFPGVC
TNGRCVNTQGSFRCECAEGLTLDSTGRTCVDMRSEQCYMKWHEDECGEPLPGRYRVDMCC
CSVGAAWGVDCEECPKPSSPEYKAICPRGHGFANRDILTGRPFYKDVNECKVFNGLCTHG
TCRNTIGSFKCRCNSGFALTAEERNCTDIDECRISPDLCGHGTCVNTPGSFECECFEGYE
SGFMMMKNCMDFDECERNPLLCRGGTCLNTEGSYECECPPGHTLSSDGSACEDVNECQLS
DNLCKNGQCVNMPGTYQCSCDTGYQATPDRQGCVDIDECTIMNGGCETHCTNSEGSYECS
CSEGYALMPDLRTCSDIDECEETPDICDGGQCTNIPGEYRCLCYDGFMASMDMRTCIDVN
ECDLNPNICLHGDCENTKGSFICHCQLGYFVKKGSTGCTDIDECEIGAHNCDMHAACINV
PGSFKCRCRDGWAGDGIKCIDEDECSAEDHNCNPNADCLNTPGSYRCTCKEGFNGDGFSC
SDMDECADNVNLCENGQCLNAPGGYRCECEMGFTPTEDSKACQDIDECNFQNICVFGTCQ
NLPGMFRCVCDDGYELDRSGGNCTDSNECADPVNCINGLCVNTPGSYLCNCPPDFELNPT
GVGCVDTRVGNCFLDILTRGDGGISCSAEIGVGVTRASCCCSLRGAWGNPCELCPAPNST
EYRTLCPGGEGFRPNPITVILEDIDECQELPGLCQGGNCVNTFGSFQCECPAGYYLNEET
RICEDIDECTTHIGICGPGTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNFNDT
CENELSFNMTKKMCCCAYNVGKAWNKPCEACPTPATSEYQLLCGNQAPGFIIDIHTGKPI
DIDECREIPGICANGVCINQIGSFRCECPMGFSYNNILLICEDIDECNSGDNLCQRNAKC
INIPGSYRCECSPGFKLSPTGACLDRNECQEIPNVCSHGECIDTQGSYRCLCHNGFKATA
DQTMCMDIDECDRQPCGNGTCKNTVGSYNCLCFPGFELTHNNDCMDIDECSALQGQVCRN
GQCINGIGSFQCFCHEGYENTPDGKNCVDINECVSLPGTCSPGTCQNLDGSFRCICPPGY
EVQNDQCIDINECEVEPNLCQDGTCTNTPGSFQCTCEPGFELSDNKRRCYDTRESFCFTK
FEVGKCSVPKAFNTTKAKCCCSKMPGEGWGLPCELCPQETEAAFNALCPYGHGALPGPGG
GARQDMNECLDNPGICQNGICINTDGSFRCECPFGYNLDYTGVNCVDTDECSIGNPCGNG
TCTNVVGGFECSCQEGFEPGPMMTCEDINECSKNPLLCAFRCVNTFGSYECMCPTGYVLR
DDQRMCRDQDECSEGLDDCESKGMTCKNLIGTFMCICPVGMQRRPDGEGCMDLNECRAKP
GICKNGRCVNTVGSYRCECNDGFEPSSTGTECIDNRKGFCYMEALQTMCQQSSTNRNSVT
KSECCCNTGRGWGSQCELCPLPGTVQYKKMCPLGPGYTTDGRDINECQVMPNLCQNGQCI
NTIGSYRCHCNVGYKTDFTATSCVDTDECSLSPKPCNFICKNTEGSYLCSCPRGYSLQPD
GKTCKDLDECSTKQHNCQFLCVNTIGGFTCKCPPGFTQHQTACIDNNECMGQNTACGSQA
SCVNTPGSFNCECAKGFSLDSTGVECEDVDECSSNHRCQHGCQNMMGGFRCGCPQGYVQH
YQWNQCVDENECQSGSMCGSASCYNTLGSYKCVCPSGFDFETSAGGCQDVNECAAGGNPC
SYGCSNTDGGYLCGCPGGFYRAGQGHCISGSGFPSQLGVEGEDDDSLSPEACYECKINGG
GKNGRHKRNANENELDHEPVSLASVDTESAIPMNLSLASLLNKEPLLELLPALQPLEHHV
RYVITHGNANEHFRLLERRDGKSVLRLGKRPPPAGSYRLDIASLPLFGPRRRNQLEEQHD
KDYLQGEIGDALRIKLHIHLH
NT seq
8706 nt
NT seq
+upstream
nt +downstream
nt
atgggatcagggaagctggcccaggtgctactgggatgggtggcgctgtgccttgcgcca
gtccaggtggcgtacggtcagactgccaatgggaatggaccggtccaggctagccgcttc
acggccaccacggaccagagagaagctcaacgggttcgacgccgtggccaggagacactg
agaggaccaaacgtttgtggttctcgtttccattcatactgctgccctgggtggaaaact
ctgccaggcgggaatcagtgcattgtcccaatttgcaggaactcctgcggggatggcttc
tgttccagacccaacatgtgcacctgttcaaacgggcagctctcttccagctgtggagca
ggaggaggagttcagtcatgcaatgtcaggtgcatgaacggaggcagttgtgctgaggat
tcctgcagctgcccgaaaggcttcacgggcaaccactgtggtcaacctgtgtgtgaaaat
ggctgccaaaatggtggacgctgcatcggccccaacagatgtgcctgtgtgtatggattc
accggccctgggtgcgagagagattacaggacagggccgtgtttcacgcaggtgaaaaac
cagttgtgtcaaggccagctcagcggaatcgtgtgcaccaagacactttgctgcgccacc
attggccgagcctggggacacccgtgcgagcagtgccccgcccagccgcacccgtgcaga
cgaggcttcatccccaacatccgcaccggagcctgccaagatgtggacgagtgtcaagct
ataccaggtctttgtgctggaggtaactgcatcaacacggtgggatcctatgagtgcaaa
tgtcccgctggccaccgtcaaagtgaaaagagccacaaatgtgaagacattgacgaatgc
agcaccatacctggcgtgtgcgatggaggcgagtgcaccaacacggctggaagttacgtg
tgcacctgcccacgaggatacatgtccagcacagatggttccagatgcgtggaccagcgt
gcgggtacgtgtttttctgcactggctaacggccgatgtgctgctgagttgaatggccaa
tacaccaagatgcaatgttgctgtgacaccggtcgctgctgggcgttgggacagattccc
gagatgtgcccagtgaggggctctgacgagttccgtcgtttatgtatagtggggattcct
cagggacatggcctccccaacggctaccccaacggatacttccctaacaataatggctac
ggacccaagtttcccagtattcccaatggcaatggggggaatggcggaggcgctttcgga
ggtaacggcggaagcttcggcggaaacggtggaggttttggagggaatggaggtggcttt
ggcggcaatggaggaagctttggagggaacggagggggacttatgacccatcatcaaata
ggcaccgtgactgtgaacgacaccactgacatctgcaagcactttaccaatctgtgtctg
aatggccgctgcattcccaaacccccaagctatcgttgcgagtgcaacatgggctacaag
caggatgtacgaggggaatgcattgatgttgatgaatgtgtgagtaatccatgcatcaac
ggcgactgcgtcaacacacccggctcatatcactgcaagtgtcatgatggcttccagggc
acacccaccaagcaagcttgtattgatattgacgagtgtattgtcaacggggtgaagtgt
cgtaatggccgctgcgtcaacaccgagggaagcttccagtgtatctgcaatgctggattt
gaactcacacctgatggcaaaaattgcattgatcatgatgaatgtgccaccaccaacatg
tgtctgaatggcatgtgcatcaatgaggatggcagctttaagtgtatctgcaagcctggc
tttgccctcgcgccaaatggacgctactgcacagacatcgatgagtgtctgacccctgga
atttgcatgaacggccgttgcatcaactctgagggttccttccgttgtgagtgcccaccg
ggcctggctattgatgtcgatggaagagtgtgcgtggatacgcacatgaggaccacttgt
tacggagccataaagatgggcacgtgctcgcggcccttcccaggagccgtgacaaagtcc
gagtgctgttgtgccaacgctgaacatggatttggagaaccctgtaacccctgtccctcc
cggaattcagctgagtttcaggccgtgtgcagcagtggcattggtatcacagctgatggc
agagacattaatgagtgcgccctggatccggacatttgtcaaaacggcatttgtgagaat
ctaagaggaagttatcgctgcatctgtaatatcggctatgagtcagacaccagcggcaaa
aactgcgttgacatcaatgagtgcctggtcaaccgacagctatgtgacaatggcctgtgc
agaaacacgcctgggtcatacacatgttcctgcccgaaaggttttgtcttcaagccagac
tcagagacatgtgaagatatcaatgaatgcgagtccagtccgtgtgtcaacggggtctgt
cgcaatgtgatcggatccttcaactgtgagtgcacccatgggagcaagctggactctacc
aacaccatctgcgtggatagcatgaagagtacttgttggctgaccatccaagacaaccgc
tgtgaggtgaacatcaacggggccacgctcaagtccgagtgctgctctacattaggagca
gcctggggaagcccctgcgaaccctgcgagatcgacacggcctgttcacgaggattcgct
cgcatgaagggcctcgtctgtgaagacattaacgagtgtgaggtgttccccggagtgtgt
accaatggccgctgtgtgaacacacaaggctccttccgctgcgagtgtgccgagggtctc
actttggacagtaccgggcgcacgtgcgtggatatgcgcagcgagcagtgctacatgaag
tggcacgaggacgagtgtggcgaaccattgcccggacggtaccgagtggacatgtgttgc
tgctctgtgggcgccgcctggggtgtggactgtgaagagtgccccaaacccagctcacct
gagtacaaggccatctgtccaagaggacacggttttgccaacagggacatcttgactggc
aggcccttctacaaagatgtgaatgaatgtaaggtcttcaatggtctgtgtactcacgga
acatgccggaacaccatcggaagtttcaagtgtcgctgcaacagcggttttgctctgacg
gccgaggagagaaactgcacagacatcgacgagtgtcgcatctccccggatctgtgcggt
catggtacatgtgtcaacactcccggcagctttgagtgtgaatgcttcgaaggttatgag
agcggcttcatgatgatgaagaactgtatggactttgacgagtgcgagcgaaaccccctg
ctgtgtcgcggcgggacttgtctcaacactgaaggcagttacgagtgtgaatgtcccccg
ggacacacgctcagctccgatggatcggcttgtgaagatgtgaatgagtgccagctgagt
gacaatttatgtaagaacggccagtgcgtcaacatgccgggaacttaccagtgttcatgt
gacaccggctaccaggccacaccagaccgacagggctgcgttgatattgacgagtgcacc
atcatgaacggaggctgtgagacccactgcaccaactccgaaggcagctacgagtgcagc
tgcagcgaaggctacgccctcatgcctgacctcaggacgtgttcagacattgatgagtgt
gaggagacgccagacatctgcgatggaggccagtgtacaaacattccaggggaataccgc
tgcctgtgctatgacggctttatggcttctatggacatgaggacctgcatcgatgtgaac
gagtgtgatttgaaccccaacatctgtctccacggtgattgtgagaacaccaaaggttcc
ttcatttgtcactgtcagcttgggtactttgtcaagaagggatcaaccggatgcacagat
attgatgaatgtgagatcggcgctcataactgcgacatgcacgccgcatgcatcaacgtt
cccggaagcttcaagtgtcgttgtcgggacggctgggctggagatggcattaagtgcatt
gatgaggatgagtgctcggcagaggaccacaactgcaaccccaacgcggattgtctcaat
acgccgggatcctacagatgcacgtgcaaggagggcttcaatggggacggcttttcctgc
tctgacatggacgagtgcgcagacaatgtcaacctttgtgaaaacggccagtgcctgaat
gctcccggaggataccgctgcgagtgtgagatgggcttcaccccgacagaagacagcaaa
gcctgtcaagatatcgacgagtgtaatttccagaacatttgcgtgtttggaacgtgtcag
aatcttccggggatgttccgctgtgtctgcgatgatggttatgaactggaccgtagtgga
ggaaactgcacagacagcaatgagtgtgctgacccggtaaactgcatcaacgggctgtgt
gtgaacacgccaggaagttacctttgtaactgcccacctgactttgagctcaatcctacc
ggtgttggttgtgtagatactcgtgtggggaactgcttcctggacatcctcacgcggggc
gacggcgggatctcctgcagcgctgagatcggagtgggtgtgaccagagcttcctgttgc
tgctcgctcagaggcgcctggggcaacccttgcgaactatgccctgcccccaactctact
gaatatcggactctttgtcccggaggggaaggcttcagacccaaccccattactgtcatt
ctagaagatatcgatgagtgccaggagcttccaggcctctgccagggtggaaattgcgtc
aacacctttggtagcttccagtgtgagtgcccagcaggttattatctcaacgaggagaca
cgcatctgtgaggacatcgatgaatgcaccacccacattgggatctgtggacccggtacc
tgctacaacactttgggcaactacacatgcgtgtgtcctcctgagtacatgcaagtcaat
ggaggcaacaattgcatggacatgaggaaaagcgtgtgctaccgcaacttcaacgacacg
tgcgagaacgagctgtccttcaacatgaccaagaagatgtgctgctgtgcctacaacgtc
ggcaaggcctggaacaagccgtgtgaagcctgcccaactcctgctacctctgagtatcag
ttactttgtggtaaccaggcccctggcttcattattgacatccataccggcaagccaatc
gatatcgatgagtgccgggagattcctggcatctgtgccaatggcgtatgtatcaaccaa
atagggagcttccgttgtgaatgtccgatgggcttcagctacaacaacatcctgctcatt
tgcgaagatattgatgagtgtaacagcggggacaacctgtgccaacgcaacgccaagtgt
atcaacattcccggcagttatcgctgcgagtgttcaccgggattcaaattgtcccccact
ggggcctgcttggaccgcaacgagtgccaggagattcctaatgtgtgcagccacggagag
tgtatcgacacccaaggcagctaccgctgtctctgccacaacggcttcaaggccacggca
gaccagaccatgtgcatggacattgatgagtgtgatcgacagccgtgcggcaacgggacc
tgtaaaaataccgtggggtcctacaactgcctgtgcttccctggcttcgagctcacccac
aataatgactgcatggacatcgatgagtgcagcgccctgcagggtcaagtgtgcagaaat
ggccaatgcatcaacggcataggttccttccaatgcttctgccacgaaggttacgagaat
acacctgatgggaaaaactgtgtcgatattaacgagtgcgtgagtttgcctggaacgtgt
tccccgggaacttgtcagaatttggatggatccttcagatgtatttgccctccgggttat
gaggtgcagaatgaccagtgcattgatatcaacgagtgtgaggtggaaccaaacctgtgc
caggatggcacctgtaccaacacccccgggagctttcagtgtacctgcgaaccgggcttt
gagctttctgacaacaagcggcgctgctatgacacccgagagagtttctgtttcaccaaa
ttcgaggtaggaaagtgttctgtcccaaaagctttcaacaccaccaaagccaagtgctgc
tgcagtaagatgcctggagaaggctgggggcttccctgcgagctgtgtccccaagagact
gaagctgctttcaacgctttgtgtccctacggccacggagcgctgcccggacctggtggt
ggtgctcgccaggatatgaacgaatgtttggataacccgggcatttgccagaatggcatc
tgcatcaacacggatggttcattccgctgtgaatgcccctttggatacaacctggactac
actggagttaattgtgttgacacggacgagtgctccattggaaacccgtgtggaaacgga
acttgcaccaatgtggtgggaggttttgaatgttcttgccaagagggctttgaacccgga
ccgatgatgacatgtgaagacatcaacgagtgctccaagaatcctctgctatgtgccttc
cgctgcgtgaacacctttggctcctacgagtgcatgtgccctaccggctacgtgctgcga
gatgaccagcgcatgtgtcgagaccaggatgagtgctcagagggtttggatgactgtgag
tccaagggtatgacgtgtaagaacctcatcggaaccttcatgtgtatttgcccggttggc
atgcagcgccggcctgatggagagggatgtatggacttgaatgaatgcagagccaagcct
ggcatttgtaagaacggccgttgcgtcaacactgtgggaagttaccgctgcgagtgcaac
gatggcttcgagcccagctccactggaactgagtgtatcgacaaccgcaagggcttctgt
tacatggaagccttgcaaaccatgtgccagcagtcatccaccaacaggaacagcgtgacc
aaatccgagtgctgctgcaacacgggtcgaggctggggctcgcagtgtgagctctgtccg
ctgcctggcaccgtccagtacaagaagatgtgccctcttgggcccgggtacaccacggat
ggcagggatatcaacgagtgccaggtgatgcctaatctttgtcaaaacggtcagtgcatc
aacactatcggatcctaccgatgccattgcaacgtcggatacaagaccgactttaccgct
acctcatgtgtcgacacggatgagtgctcactctctcccaagccgtgtaactttatctgt
aaaaacacggagggtagctacctgtgttcctgtccaagaggatacagcctgcagcctgac
ggaaagacctgcaaagatctggatgagtgttccaccaagcaacacaactgccagttcctt
tgtgtcaacaccattgggggcttcacttgcaagtgtcctcctggcttcactcagcatcaa
acagcctgcattgacaacaacgagtgcatgggtcagaacactgcgtgcggttctcaggct
tcttgtgtcaacactcctggtagcttcaactgtgagtgtgctaaaggcttctccttggac
agcacaggcgtggagtgtgaggatgtggacgaatgtagcagtaaccaccgttgtcaacat
ggctgccagaacatgatgggaggtttccgctgcggctgtcctcaaggttacgtgcagcac
taccagtggaaccaatgtgtcgatgaaaacgaatgccagtcgggctcaatgtgcggctcg
gcttcctgctataacacgttgggcagctacaaatgcgtgtgcccctccggttttgacttt
gaaacgtctgctggcggctgccaagatgtgaacgagtgcgccgcgggaggcaatccgtgt
tcgtacggctgctccaacacagatggaggatacttgtgtggatgccctggaggtttctac
agggctggacaaggtcactgtatatcaggctcaggcttcccaagccaattgggcgtggaa
ggcgaggacgatgacagtctgtctcctgaggcctgctacgagtgtaagatcaacggagga
ggaaagaacggacgacacaaacgcaacgcaaatgaaaatgagctcgatcatgagccagtg
agtctggccagcgtggacacggaatccgccatccccatgaacctttcactggcctcgctc
ctcaacaaggaacctctgctggagctgctgcccgccctgcagccgctggagcaccacgtg
cgttacgtcatcacacacggcaacgccaacgaacacttccgcctgctggagcgccgcgac
ggaaagagcgtgctgaggctgggcaagaggccacctcccgccgggtcctaccgactcgac
atcgccagcctgcccctgttcgggccccggagacgaaaccagctggaggagcagcatgac
aaggactacctacaaggggagattggggacgccctgcgcattaagcttcacatccatctg
cactga
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integrated database retrieval system