Syngnathus scovelli (Gulf pipefish): 125969383
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Entry
125969383 CDS
T08785
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125969383
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
125969383
Peptidases and inhibitors [BR:
sscv01002
]
Serine peptidases
Family S54: Rhomboid family
125969383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
DUF5580_M
AIF-1
EF-hand_11
EF-hand_4
EF-hand_9
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
125969383
NCBI-ProteinID:
XP_049577296
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MAGGNRELTVTSSPAVAANAEGEEIEVLESTDVLPVAPEDKWKELFDKYDVDNSGFISTE
RFRDLLATHGSELDPHKLEVLLALADGNADGKICYQDFVNLMSNKRSNSFRRAILQGGRH
LKGNSLRDEVGLGLSQRLVRHVAYETLPREVDRKWYFDSYNYWPPPWLILTITILEVVVF
FYYGCHLDRLVLQVSSPSFLKSPLPYHPQLRAQAWRYLSYIFMHTGIEHLSLNMAMQLLV
GVPLEMVHGAARIGLVYACGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLANVVMNWS
GMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVMVGLTLGVVV
LQNYEQRLQEQSLFWIFFCVYTLFVLCAVFWNIFAYSLLEVRLPPPP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcaaccgggagctgacggtcacctcctccccggcggtggcggcgaacgcg
gagggagaggaaatagaagtgttggagagcactgacgtccttccagtggctcccgaagac
aaatggaaggagctgtttgacaagtatgacgtggacaattcgggctttatcagtaccgag
cgcttcagggaccttttggcgacgcatggctccgagctggacccccacaagctcgaagtc
ctcttggccctggcagatggtaacgcagatggaaaaatctgctaccaggatttcgtcaac
ctgatgagcaacaagcgctccaatagtttccggagggcaatcctccaggggggcaggcac
ttaaaaggcaacagtctccgagatgaggtcggcctgggtctttcccagcgcctggtccga
cacgtcgcttatgagacgttgccgcgcgaagtggatcgcaagtggtattttgacagctac
aactactggcccccaccatggctgatcttgaccatcaccattcttgaggtagtcgttttc
ttttattatggatgtcatctggaccgcctagttctgcaggtatccagcccatcattcctt
aagagtcctctaccttaccacccgcagctccgggcccaggcctggaggtacctcagctac
attttcatgcacaccggcattgaacacctgagcctgaatatggccatgcagctgctggtg
ggagtccccctggagatggtccacggggcggcgaggatcggactggtctacgcgtgtggc
gtcttggcaggctctctggccgtgtccgtcactgacatgacggctcccgtggtcggttcg
tctggtggggtgtacgctctggtttccgctcacctggccaatgtagtcatgaactggtcc
ggcatgaagtgtcagtttaaattattccggatggccatggctctggtgtgcatgagtgtt
gaatttggccgggcggtgtggctccgcttttacccgccagcatttcctccttgccccaac
cccagctttgtagctcacttgggcggggtgatggtgggtctcaccttgggcgtggtggtc
ctgcagaactacgaacagcggcttcaggagcaatccctcttttggatcttcttctgcgtc
tacactttgtttgtgctctgcgccgtgttctggaacatttttgcctacagtttgcttgaa
gtgagattgcctccaccaccatga
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