Syngnathus scovelli (Gulf pipefish): 125969408
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Entry
125969408 CDS
T08785
Symbol
arhgef38
Name
(RefSeq) rho guanine nucleotide exchange factor 38
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125969408 (arhgef38)
Membrane trafficking [BR:
sscv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125969408 (arhgef38)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
BAR
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
125969408
NCBI-ProteinID:
XP_049577404
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All DBs
Position
5:3014117..3023373
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AA seq
797 aa
AA seq
DB search
MDPNEAGGAEKKGEKVIKRRNRPVFLRYLERRKTDSIVTDDTCKGDINLGTLVRRSQSDK
TEYSAKLKEKMTPHDLSSPASPALDPEEVRSRKMTRRSKVIQELIQTEKDFHTNLELCIR
EVLQPLRSIQVVDVDHLFTNMETVCEVSSALLNRLREALSDPDPEAVIIGEVFIQAKAAL
EDVYKIYCYHHDDANMVLESYEKEEGIKQHFTTCLLAMKKLYDQKGKPYLLDMGSLLIKP
VQRIMKYPLLLGELWQATPEDHPDFRPLQEAFTAVKIINVNINEFKRRKDIVMKYKNSED
EGTLRKLHKFNIHSIRKKSDRFAGYLKILTGVEPQVRDEVFDREEKLFRGLEKAVRQLVK
NLQSYLQYTQEMVSVAVNKVHEMESIIKESNGSSHTKSHDPYERYKDNMERLVLGPLSSL
QGMFTAPQKLIQKRYDKLLDYCSRLERSSFSPSSSSSTSSSTPCLVSVDPPGPARRDYEA
LNALLVEELQRFNMAAYAILTNCAAYIVTLLRGLMEEILLAAPSIQQLPAPLSNIAEVQN
SIMDELNNLGFVKENAQKLMERKVSFERQREKKIATPEVEHQTEEQRARLLAEYPPSRLY
QLKRKCNGCQKEDLSLLEGELVALLEDTDPLGSSSRWLVHTGGKQGYVYSTFLKQYNPLR
DSQRKGQAAKQQQQEQQPTAMTDEDFDDLSLFVSGSGSSSLRSFSLNTTDSSSNLSGLQG
ELDTVDLEVSFDTDAQQYYAVYAFEARCDQELTLQEYQHVRILQFNDQGGNKEWWLAEVD
GQRGYVPANYLGRMSYA
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaacgaggccggcggcgctgagaagaaaggggagaaggtcatcaagcgcagg
aaccgacctgtgttcctgcgctacctggagaggaggaagacggacagcatcgtgactgac
gacacctgcaaaggtgacatcaatctggggacgctggtgaggcgcagtcagtctgacaaa
acggagtacagcgctaaacttaaagaaaaaatgacaccgcacgacttgtccagtcctgcc
tcgcctgcgttggacccagaggaggtccggtcgagaaagatgactcgccgatcaaaagtc
atccaagagctgatacagactgaaaaagacttccatactaacctggagctgtgcatccga
gaagtgttgcagcctctgaggagcatacaggttgtcgatgtggatcatctgttcaccaac
atggagacggtgtgtgaagtctcatccgcactcctaaatagacttcgggaagccctgtcc
gacccggatcctgaggcggtcattatcggagaagtattcatccaggcaaaagcagcttta
gaggatgtctataagatttactgctaccatcacgatgatgctaacatggtgctggaatcg
tacgaaaaagaggaaggaataaagcaacatttcacgacgtgtttactagcaatgaagaaa
ctctatgaccaaaaagggaagccctacttgctggacatgggttcgcttctcatcaagcca
gtccagaggatcatgaaatacccgctgctgctgggcgagctgtggcaggccacgcccgaa
gatcaccccgatttccggccgttgcaagaagccttcaccgccgtgaagatcatcaacgtc
aacatcaatgagttcaagcgacgcaaggacatagtgatgaagtacaaaaattcagaagat
gaaggaactctgcgtaaacttcacaagttcaacattcactccattaggaagaaaagtgat
cgcttcgcaggttatctcaagatcctcactggagttgaaccacaagtgagggatgaagtg
ttcgacagagaggagaaactcttcaggggtctggagaaagcagtaaggcagctagtaaag
aatctccaaagttacttgcagtacactcaggagatggtgtccgtcgctgttaacaaagtc
cacgagatggagagcataatcaaagagtcaaacggctcatcgcacacgaaaagtcacgac
ccctatgaacgctacaaagacaacatggagcgtctggtcctcggcccactttcatctctt
cagggcatgttcactgcgccccaaaagctcatccagaaacgttacgacaaactgctcgat
tactgcagccggctggagcgctcgtcgttttcgccctcatcctcgtcatctacctcttcc
tccaccccgtgcttggtatccgtagacccacccggtcccgccaggagggactacgaggct
ctcaacgcgttgctcgtggaggagttgcaacggttcaacatggctgcctacgctatcctc
actaactgcgcggcgtatatcgtgaccttgctcagaggcctgatggaggaaattttgttg
gctgctccctccatacagcaactaccagctccgttgtctaacatcgctgaggtgcagaac
agcatcatggatgagctgaacaatctggggtttgtcaaagagaacgcacagaaactaatg
gagcggaaagtcagcttcgaaaggcaacgagaaaaaaaaatagcgacgccggaggtggag
catcagacagaagaacaacgtgcccgactgctggccgaatatcccccgagtcgtctgtac
cagttgaagaggaagtgcaacggctgccagaaggaggacctcagcctgctggagggggag
ctggtggccttgctggaggacacagacccgttgggcagtagcagtcgctggctggttcac
accggagggaaacagggatacgtgtactccacgttcttaaagcagtacaaccctctgagg
gactcgcagaggaaaggccaggcggccaaacagcagcaacaagaacagcaaccgaccgcc
atgaccgacgaagactttgacgatctgagcctttttgtatcgggcagtggaagcagcagc
ctgaggagcttcagtctcaacaccaccgacagtagctccaacctttcgggccttcagggc
gaattggacaccgtggacctggaggtttcgtttgacacagatgctcagcagtactacgcc
gtatatgcatttgaagcccgttgtgaccaggaactgactttgcaggagtaccaacatgta
cgaatcttgcaattcaatgaccaaggtggtaacaaggaatggtggctcgcggaggttgat
ggtcagcggggatacgtccccgccaactaccttggtaggatgtcctatgcatga
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