Syngnathus scovelli (Gulf pipefish): 125969414
Help
Entry
125969414 CDS
T08785
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 9B
KO
K19951
TBC1 domain family member 8/9
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125969414
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125969414
Endosome - Golgi transport
Rab GTPases and associated proteins
125969414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
125969414
NCBI-ProteinID:
XP_049577437
LinkDB
All DBs
Position
1:complement(29469489..29477272)
Genome browser
AA seq
1182 aa
AA seq
DB search
MWIHPEEVLLAGPLWVSERANPFFILQRRRGHGRGGGLSGLLVGTLDVVLDSSARVAPYR
ILLQTADSQIFWNVACGESRPRMGLLTPTDFXPVGRPRVAGSSRKEITEHWDWLEANLLQ
TVATFDNDSDVATFVRGKISGLIAEEKRATTGHDGQEEDCSKFQEAQLKMRKLFGMPEEE
KLVNYYSCSYWKGRVPRQGWLYLSVNHLCFYSFLLGKEVTLVVPWTEVTQLEKNATLLFP
ESVRVRTRVGEHFFSVFLNINDTFKLMEQLANMAMRQLLDNEAFAADLSLPKPRKTLKNV
SALKRDLDARAKNERYRSTFRLTQDERLDGHTDCTLWTPFAKMHVVGQLFISNNYICFRS
REEDLCQLIIPLREVSIVEKADSSSVLPCPVSISTKNKMNFLFANLKDRDFLVQRISDFL
QRTPDDSSWGDVSPLAAAASSGVAKERHYHPDVPTATQGLLQLYRKDAPEDLGPKAMKEK
MKEEAWNIHFSEFGRGVCMYRTSKSRELVLGGIPERLRGELWMLFSGARNEMSMHAGYYG
DLVERAAGLCSLATEEIERDLHRSMPEHRAFQNETGIGALRRVLTAYAHRNPGIGYCQAM
NIVTSVLLLYCTEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEDLTRAFLPLLYQH
MQDLGVISTISLSWFLTLFLSVMPFDSAVVLVDCFFYEGIKVIFQVALAVLHDNMDALLA
CSDEGEAMTVLGRYLDHVVNKQIATPPVPHLHALLTGGDEPPPEIDIFELVQSSYEKFSG
LRSDVIEQMRFKQRLKVIQSLEDTAKRSVVRAMVTESAFGMEELEELYCLFKARHMSSRY
WGSGGTAAERHDPSLPYLEQYRIDAAQFSQLFCALAAWRCAGHAPVLAGRLFRTLDRDRD
GLVNFKEFVTALSGMYHGDMTDKLKLLYKLHLPPALCPEEAESALEAANFFTDDTPKESS
FLSLKDSFGPQRVTAGEDANAESDGSGEEKKEDYRYYLRMWAKEKEPKQESIKDLPRMNQ
EQFIELCKSLYNMFSEEEHDEQQLYHAIATVASLLLRIGEVGKKFNNGDRQGAAGRQAPA
DIRPEEARDDTSASSFSTLSDDASSADEGGGEGPRRRRVSAADADWSVTFEQVLASMLTE
PALVDYFERKRSIQARIAACQTRRAAERQSSSASSDRERGDT
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccacccggaggaggttcttcttgctgggcctctctgggtgtccgagcgggcc
aacccgttcttcatcctgcagcggcggcggggccacggccgcggaggggggctctccggt
ctactggtggggactctggatgtggttctggactccagcgccagggtggccccctacagg
atcctcctccaaacagccgactcgcagatcttctggaacgttgcctgcggtgagtcccgc
ccccggatgggactcctgaccccgactgacttttgacccgtgggccggccgcgtgtggca
ggttcctcgcgcaaggagattacagagcactgggattggctggaggctaacctgctgcag
acagtcgccactttcgacaatgacagcgacgtcgccacgttcgtcaggggcaagatttcc
ggcctgatcgcagaggagaagcgggcgacgacgggccacgacgggcaggaagaggattgc
agtaagttccaggaagcccagctgaagatgcgcaaactgtttgggatgcccgaagaggag
aagctggtcaactactactcgtgcagctactggaaaggtcgcgtgccgcggcagggctgg
ctctacctgtccgtcaatcacctctgcttctactccttcctactgggcaaggaagtcact
ctggtggtcccgtggacagaagtgacccagctggagaagaacgccaccctgttgttcccg
gaaagcgttcgcgtgagaactcgggtcggggagcacttcttctccgtgttcctcaacatc
aacgacaccttcaagttgatggagcagctggccaacatggccatgcggcagctgctggac
aacgaggccttcgccgccgacctctcgctgcccaaaccccgcaagaccctcaagaacgtc
tccgccctcaagagggatctggacgcgcgggccaagaacgagcgttaccggagcaccttc
cgtctgacgcaggacgagcgtctggacggacacacggactgcacgctgtggacgcccttc
gccaagatgcacgtggtgggccagctcttcatctccaacaactacatctgcttccggagc
cgagaagaagacctgtgccagctcatcatcccgctcagagaggtttccatcgtggagaag
gcggacagcagcagcgttctgccgtgtcccgtgtccatcagcaccaagaacaaaatgaac
ttcctgtttgccaacctcaaagatcgggacttcctggtccagcgcatctccgacttcctg
cagaggactcccgacgacagctcgtggggggacgtcagtcctctggcggccgcggcatct
tccggcgtcgccaaggagcgccactatcaccccgacgtgcccacggccacgcaaggactt
ctgcaactttaccgcaaagacgctccagaggacctgggccccaaagctatgaaggagaag
atgaaggaggaggcgtggaacatccacttttccgagtttggccgcggagtctgcatgtac
aggacgtccaaaagccgagaattagtcctgggcggtattccggaaaggctccgaggagaa
ctctggatgctcttctcaggagcgcgcaacgagatgtccatgcacgccggttactacggc
gacctggtggagcgggcggcgggcctgtgctctttggccacggaggagatcgagcgggac
ctgcaccgctccatgcccgagcaccgagccttccagaacgagacgggcatcggcgccctg
cgccgcgtcctgacggcctacgcccacaggaacccgggcatcggctactgccaggccatg
aacatcgtgacgtcggtgctgctgctgtactgcactgaggaggaggccttctggctgctg
gtggcgctctgcgagcgcatgctgcccgactactacaacaccagggtcgtgggcgctctg
gtggaccagggggtgtttgaagacctgacccgggccttcctgcccctgttgtaccagcac
atgcaggatctgggcgtcatctccaccatcagcctgtcgtggttcctcaccctcttcctg
tccgtcatgcccttcgacagcgccgtggtcctggtcgactgcttcttctacgagggcatc
aaagtcatcttccaggtggcgctggcagtgctccacgacaacatggacgctttgttggcc
tgcagcgacgagggcgaagccatgaccgtcctgggaaggtacctggaccacgtggtgaac
aagcagatcgccacgccgcctgtcccccacctgcacgccctcctcaccggcggagacgag
ccaccgcccgagattgatatcttcgaactcgtccagtcctcctatgagaagttcagcggc
cttcgctccgatgtcatcgagcagatgaggttcaagcagaggttaaaggtgatccagtct
ctggaggacacggcaaaacggagcgtggtgcgagccatggtgaccgagtcggccttcggc
atggaggagttggaggagctctactgcctctttaaggcccggcacatgagcagccgctac
tggggctcgggcggcactgcggcggagcgacacgaccccagcctgccctacctggagcag
taccgcatcgacgccgctcagttctcgcagctcttctgcgccctggccgcctggcgctgc
gccgggcacgcgcccgtcctggccggccgactcttcaggacgctggatcgcgaccgcgac
ggcctggtcaacttcaaggagtttgtcacggcgctcagtgggatgtaccacggcgacatg
acagacaagctcaagctgctttacaagctccacctgccgcctgctctgtgtcccgaggag
gcggagtccgcgctggaggctgcaaacttcttcaccgatgacacgcctaaagaatcttcc
ttcttgtctcttaaagacagttttggaccgcagcgagtgacagcaggtgaggacgccaac
gccgagtctgacggcagcggcgaggagaagaaagaggactacaggtactacctgcggatg
tgggccaaggagaaggagcccaagcaggaatccatcaaagatcttcctcggatgaaccag
gagcagttcatcgagctgtgcaagtcgctgtacaacatgttcagtgaagaggagcacgat
gagcagcagctctaccacgccatcgccaccgtcgccagcctgctgcttcgcatcggcgaa
gtcggaaagaagttcaacaacggcgacaggcagggcgccgccggacggcaggcgccggcc
gacatccgcccggaggaggcccgagacgacacgtcggcctcatcgttctccacgctgagc
gacgacgcatcgtcggccgatgaaggcggcggcgaggggccgaggaggaggcgggtcagc
gcggccgacgccgattggtccgtcaccttcgagcaggttctggcgtccatgttgaccgag
cctgcgctggtggactactttgagaggaagagaagcatccaggcccgtattgccgcttgc
cagacacgccgggcggcggagcgtcagagcagctctgcctcttcggaccgcgaacgtggc
gacacttga
DBGET
integrated database retrieval system
