Syngnathus scovelli (Gulf pipefish): 125969496
Help
Entry
125969496 CDS
T08785
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125969496 (mindy4)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125969496 (mindy4)
Ubiquitin system [BR:
sscv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
125969496 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
FOP_dimer
Motif
Other DBs
NCBI-GeneID:
125969496
NCBI-ProteinID:
XP_049577554
LinkDB
All DBs
Position
10:complement(6820294..6825806)
Genome browser
AA seq
676 aa
AA seq
DB search
MVICVEEVSASLVREYLSRKGLKKTIACMDEERPRTQSSINNRSHLRQVLHIEDLYRANK
ARSSPLRTLLEIIVKHHIEGHKDDPIACEGNDSLLPAKTPSQMNESNSDHSTASFVSGDH
IKLRSHDKEASSPPRVVLSLDRQGIINHSATRTWLNASVDETHQCKMTSQHDHDRLTEAV
NNSPINEVSQRSRPSRVRRGILAGPISSTLQESTKQRQSRKVVTPQLPFRREEEPRQSWD
GLSGKSFQQKVLKKSQSDATEGVKSLEGEGEGRYDRKIVKSKTQPNVRDLSELVLDDIDD
ELPEFPKISIKNTATAASSHTVRPMDQHTASELKSILLGSSLKCFTVEWRNQGFAFSDTH
DLRYGVVQKKGGPCGVLASIQAFVLKKLLFENIDSSYTRLQRLRPTNATRRKCLVLAVAE
VLWRAGDEKQATVAINSGRMLFTPSGHYKSEGVLEKINCFTVDSIKNLHSLLEQNIEQFE
TGELGCLLLTISAVLSRSIDKLKEDMDVATTALIGAHGYCTQELVNLLLVGRAVSNVFDG
NVELDSGNGNSTLLKGIKSHCNIGLLSLFEHYNIFKVGDFLKNPLFPIWVVCSESHFSVL
FGLQEELLTSQDKSAEFDLYYYDGLANQQEEIRLTVSVGKSDLSCQDADLIPPLELCIRT
RWKDAFVSWNDTEPIL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggtcatttgtgtggaggaggtgtccgcgtccctcgtgcgggaatatctgagcagaaag
ggactcaagaagacgatcgcgtgcatggatgaagagcgtccacgcacacagtccagcatc
aacaacagatcccacttgagacaagttctgcacattgaggatctgtacagagcaaataag
gctcggagttcacctttgaggactttactggaaatcattgtcaagcatcacattgaaggt
cacaaagatgacccgatagcctgtgaaggcaatgacagtcttcttcctgcaaaaactccg
tcgcagatgaacgaaagcaactcagatcacagcacagcgtcttttgtttctggtgatcac
atcaaattaaggtcacatgacaaggaagcatcctcacctccacgggtggtattgtcactt
gatagacagggaattattaaccacagtgcaactcggacgtggttgaatgcctcagtagat
gaaacccaccagtgtaagatgacgtctcaacatgatcacgatcgccttactgaagctgta
aacaactctcccattaatgaagtcagtcaaaggagccgacccagtcgggttcgacgcggt
atcttggcgggaccgatatctagcacccttcaggagtcaaccaaacaacggcagagtcga
aaagttgttacccctcagctgccgttcaggagagaagaggagcccagacagtcttgggat
ggactgtcagggaagagtttccaacaaaaagtcctgaaaaaatcccaaagtgatgctaca
gagggagtgaagagcttggagggagagggagaaggcagatatgacagaaaaatagtgaag
tctaagacgcagccaaacgtgagagatttgtctgagttggtgttagatgacattgatgac
gaactgccagaattccccaaaatttccatcaagaacacagcaactgcagcgagcagccac
acagtccgtccaatggaccaacacaccgcctcggaattgaaatcaattctccttggctca
agtctgaaatgtttcaccgtcgaatggcgaaatcagggctttgcgttctccgacacgcat
gacttgagatatggagtggtgcagaaaaagggtggtccttgtggggttctagcttccatc
caagctttcgttttaaagaaacttctctttgaaaacatagacagtagttacacaagactt
cagcgtttaaggccaacaaatgcaaccagaagaaaatgtctggttttagccgtggctgaa
gttctgtggagggccggcgacgagaaacaagccacagtagcaataaactcgggaagaatg
cttttcactccaagcggacattacaaatctgaaggagtgcttgaaaagataaactgtttc
acagtggacagcattaaaaacctgcattcgctactggagcaaaacattgagcagtttgag
acaggggagttgggatgtctactgctgaccatatctgccgtcctgtctcgatctattgat
aaactgaaagaagatatggacgtggccaccaccgcgctcattggcgctcatggctactgc
actcaagagcttgtcaaccttctgctggtgggacgagcagtttcaaacgtctttgacggc
aatgtggagctggactcgggcaacggcaactctacgctgctcaagggcattaaatctcac
tgcaatattggccttctgtctctgttcgaacattataacatctttaaggttggagacttt
ctgaagaacccccttttccccatttgggttgtgtgcagtgaaagccacttcagtgtgctg
tttggcctgcaggaggagctgttgacaagtcaggataaaagtgcagagttcgacctgtac
tattatgacggcttggccaatcagcaggaagagatccgcctcactgtctctgtcggcaaa
tcagatttgagctgtcaagatgctgatttaattcctcccttggaactctgcattcgaaca
aggtggaaagatgcatttgtgagttggaatgacacagagccaattctatga
DBGET
integrated database retrieval system
